| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0320 |
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| Symbol | |
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| ID | 7387774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 276197 |
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| End bp | 277768 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643650000 |
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| Product | NADH Dehydrogenase Protein |
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| Protein accession | YP_002548215 |
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| Protein GI | 222147258 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCCATCC AGTTCCTGCC CTTGCTGGCG CCCCTTGCCC TGCTTGCAAG CGCCGTCATC
AGCTTTGCTC AAAAACAGCA AAGGCCCAGA TATAGTCCTC GGCTGGCGCA GGCCGCAGCG
CTGCTGGCAC TTGCAGTCGC GCTGGCCGCA GTTATCGCGC TGATCCTGCT AGGCCCCGGC
AGCAGCCCGT TGATCGGGTT TGCCACGGTG GGTCTATCGG TTCGGCTGGA TGCCGTCAGC
GCTACCATGC TGGTTCTGGT GACATTCATC GGCTGGGTGG TCACACGCTA TGCCGCCACC
TATCTGGATG GCGAGGACCG GCAGGGAGCG TTTACCGGTT GGCTCTGCCT GACCCTCGCT
GCGGTGCTGT TGCTGGTCAC GGCAGGCAAC CTGCTGCAAC TGGTGCTCGC CTGGATCGCT
ACCAGCCTGT TTCTGCATAA ATTGCTGCTG TTTTATACGG GGCGGGTGGC GGCCCAGCGC
GCCGCACGCA AGAAATTCAT CACCGCCCGC CTCGGCGATG CAGCGCTGGC CGCTGCGGCC
GCTTTGCTGG CAATGGCGTA TGGAACCGCC GATATCGGTG AAATTCTCAA TGCTGCCCGT
GCCGGATATG ACGCAGGACA GAGCGGAGGC CTTATTGTTG CCGCAGCAAG CCTGCTGGCG
CTGGCAGCCG CGCTTAAATC CGCGCAGTTT CCCACCCATG GCTGGCTGAC CGAAGTGATG
GAAACGCCAA CGCCGGTCTC AGCGCTGCTG CATGCGGGGG TGATCAACGC CGGTGGCTTT
CTGCTGATCC GTTTTGCCGA TGTCATGCTG CTTGCCCCCG GCGTGCTGGC GGCGCTGGTC
ATACTGGGCG GCTTCACGGC CCTGTTCGGC AGTCTGGTGA TGCTGACCCA ACCAGCGGTC
AAAACCTCGC TCGCCTGGTC TACCGTGGCG CAGATGGGCT TCATGATCTT CGAATGCGGC
CTGGGGCTGT TTGCGGTGGC CCTGCTACAT ATCGTGGCGC ATTCACTCTA CAAAGCCCAT
TCCTTCCTCG CCTCCGGTGG TGCGGTAGAA CGGGTCGCCG CGATACCCAG GCCCGGCCCG
GTGGCCATAC CCAATGCGGG CGCAGTCGGG CGAGCCTTTC TGTCGGCCCT TGCCATCTAC
TGTGTCGTGG GCTTGTGTTT CGGGCTGGCG CATAAATCGC CACAGGCCAT TGCGCTCGGT
GCCATCCTGA TTTTCGGTGT CGCCTATATG CTCGCCCAGG GCTTTGCCGA TGCGGCCCCC
AAGGCATTGA CCCGGCGCAC GGCGCTCTAT GCCATCACCA CTTCGGTCGG CTATTTCGCC
CTGCAAATGG CTGCCACCCT GATGACATCA GGGGTCCTGC CCGCCACGCC TGCACCGCAA
CCGCTGGAAT GGGCGCTGAT CGCGCTGGCC GTCGTCAGCT TCGGGCTGGT CGCCGTGGTG
CAGGCGATGT TCCCGCTCTG GGCCTATCAT CCGGCAGCGG CGGGCCTGCG CGTCCATCTT
TCCAACGGCT TCTACGTCAA TGCCATCTTC GACCGCCTGG TCGGTGGCTG GTCGATCCGC
AGCCTGTCTT GA
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| Protein sequence | MSIQFLPLLA PLALLASAVI SFAQKQQRPR YSPRLAQAAA LLALAVALAA VIALILLGPG
SSPLIGFATV GLSVRLDAVS ATMLVLVTFI GWVVTRYAAT YLDGEDRQGA FTGWLCLTLA
AVLLLVTAGN LLQLVLAWIA TSLFLHKLLL FYTGRVAAQR AARKKFITAR LGDAALAAAA
ALLAMAYGTA DIGEILNAAR AGYDAGQSGG LIVAAASLLA LAAALKSAQF PTHGWLTEVM
ETPTPVSALL HAGVINAGGF LLIRFADVML LAPGVLAALV ILGGFTALFG SLVMLTQPAV
KTSLAWSTVA QMGFMIFECG LGLFAVALLH IVAHSLYKAH SFLASGGAVE RVAAIPRPGP
VAIPNAGAVG RAFLSALAIY CVVGLCFGLA HKSPQAIALG AILIFGVAYM LAQGFADAAP
KALTRRTALY AITTSVGYFA LQMAATLMTS GVLPATPAPQ PLEWALIALA VVSFGLVAVV
QAMFPLWAYH PAAAGLRVHL SNGFYVNAIF DRLVGGWSIR SLS
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