Gene Avi_0296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0296 
Symbol 
ID7387590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp251390 
End bp251740 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content60% 
IMG OID643649980 
Producthypothetical protein 
Protein accessionYP_002548195 
Protein GI222147238 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.128484 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCTGG AACTGACCGC AACGGCAGCG CTAGGGCTTT GGCATCACGT GACTTTGCGA 
CAGGTGCAGG AGGATGGCCG CGACCTGACG CTTCGCCAGC TCTCCATCCT GCTGCATATC
TATCTGGTTC CGCCGCCGCA TACCGTGCGG GGGCTTGCCG CCACCCTCAA GGTTACCAAG
CCGGTCATTA CCCGCGCACT CGATACCATG GGCGGCATGG GGTTTGTTGA TCGGGTGCGC
GATGATATGG ACAAGCGCAA TGTCATCATC AAGCGCACTG TGGCAGGCGC GCTTTATCTG
GAAAAATTCG GCGACCTGAT CATTGAGCAG GCGCGTGGCA TGAGGACGTG A
 
Protein sequence
MSLELTATAA LGLWHHVTLR QVQEDGRDLT LRQLSILLHI YLVPPPHTVR GLAATLKVTK 
PVITRALDTM GGMGFVDRVR DDMDKRNVII KRTVAGALYL EKFGDLIIEQ ARGMRT