| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0284 |
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| Symbol | phnE |
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| ID | 7387581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 240965 |
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| End bp | 242464 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643649971 |
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| Product | ABC transporter membrane spanning protein (phosphonate) |
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| Protein accession | YP_002548186 |
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| Protein GI | 222147229 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3639] ABC-type phosphate/phosphonate transport system, permease component |
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| TIGRFAM ID | [TIGR01097] phosphonate ABC transporter, permease protein PhnE |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACATC TCGACGCCAC CCAAATGGAC CTGATCGCCG CCCGTCATCC AGACATCTTC
CGCCGCAGCC TGTGGCAGCG CTACCGCGTG CCGCTGACCA TTGTCCTGCT TGCGCTGTAT
TTCACCTTTT CCTGGTGGTT CTTTGCGGTT GGAAAAGTGG TCTCCACCGC CAGCTGGGGC
ATTGCCGGCA ATTATCTGGC CGATTGGGTT TCCTATGAGA TCCGGCCGGA AATCAATATT
GCCCCCGATG GGGCGATTTC CATCGCCTAT TCGCGCTTCG ACCCGATTGG TCCCAACCCC
AACCCGGATT GGCTGGTGAC GAAGCAAGAA ATGATGACGC GCACGAGTGG CGTAGCCGAT
GCGCCCGCGC CAGTGACGTC AGCGCCAAAA GCCTCGAGCT TCAATTTCAT GGCAGCAGCC
CCGCAACAGG CACCGGTCGC GGCGCAAGCG GCACCCGTCA CGCGCCAGGA ACAGGTGATA
AGAGAGGCCG ATGTCAATCT CGGCTCCAGC GCATCGCTGC TGGTTAGCCC AGAAAGCGTG
GTGCTGAACC GGGGCGCTGA GCGCGTTACC CTGATGCTTG ACCGCAAGGC GGGCACCGTG
ATTGCCGATG GCACGCTGCC AGCCTGGGTC GAGCAACGCG AACGTGGCGG CAGGGTCATG
GCCTATTTCG GCCTGCAGGG TTGGGCTGAT ATCAGCGCCG ACCGGGTCAG GGTGCGCAAC
CGGTTTTTCG GCTGGGCCAA TTTCCTGTTC GATACCAATT CCGCGTTTTT CGGCAGGTCC
GCAACTGAAG TGGTCAGCCT GATCGCCACC GGTCCAAGGC TCGATCCACA ACAGTCCAAT
CTGTCGCTGG CCTGGAACGA CATTCTCTAC AATCCGTCCT GGCAGCATCT GGATGTCTGG
ACCAAGCTGG CGCAAACGCT CGTTATGGCC TTTGTCGGCA CGGTGTTTGC ATCGCTGATC
GCTTTTCCGT TGTCCTTCAT CGCGGCGCGC AACATTACCC GCAACCGTCC GGTCAACCAG
TTGACCAAGC GGTTCTTCGA TTTCCTGCGC TCGGTGGATA TGCTGATCTG GGCGCTGTTT
TTCACCCGTG CCTTCGGGCC GGGGCCGTTG GCCGGGATCT CGGCGATTTT CTTCACTGAC
ACAGGTACGC TCGGTAAGCT CTATTCCGAA GCGCTGGAGA ATATTGACGA CAAGCAGCGC
GAAGGGGTGA AGTCGGTTGG TGCTTCGCCG CTTGCCGTAC AGCGCTTCGG CGTGTTGCCA
CAGGTTTTGC CGGTCTTTGC ATCGCAGGCT TTGTATTTCT GGGAATCCAA CACCCGCTCA
GCCACCATTA TCGGCGCGGT CGGGGCAGGT GGTATTGGCC TGAAGCTTTG GGAAGCGATG
CGCACCAACC AGAATTGGGA AAATGTCTGT TATATGGTGC TGTTGATCTT GCTGGTGGTG
TTTATCTTCG ATGCCGTGTC CAACCTGCTG CGCTCAAAAC TGATCGGCGG GCAAAAATGA
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| Protein sequence | MTHLDATQMD LIAARHPDIF RRSLWQRYRV PLTIVLLALY FTFSWWFFAV GKVVSTASWG
IAGNYLADWV SYEIRPEINI APDGAISIAY SRFDPIGPNP NPDWLVTKQE MMTRTSGVAD
APAPVTSAPK ASSFNFMAAA PQQAPVAAQA APVTRQEQVI READVNLGSS ASLLVSPESV
VLNRGAERVT LMLDRKAGTV IADGTLPAWV EQRERGGRVM AYFGLQGWAD ISADRVRVRN
RFFGWANFLF DTNSAFFGRS ATEVVSLIAT GPRLDPQQSN LSLAWNDILY NPSWQHLDVW
TKLAQTLVMA FVGTVFASLI AFPLSFIAAR NITRNRPVNQ LTKRFFDFLR SVDMLIWALF
FTRAFGPGPL AGISAIFFTD TGTLGKLYSE ALENIDDKQR EGVKSVGASP LAVQRFGVLP
QVLPVFASQA LYFWESNTRS ATIIGAVGAG GIGLKLWEAM RTNQNWENVC YMVLLILLVV
FIFDAVSNLL RSKLIGGQK
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