| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0282 |
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| Symbol | phnE |
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| ID | 7387580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 239993 |
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| End bp | 240955 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643649970 |
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| Product | ABC transporter membrane spanning protein (phosphonate) |
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| Protein accession | YP_002548185 |
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| Protein GI | 222147228 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3639] ABC-type phosphate/phosphonate transport system, permease component |
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| TIGRFAM ID | [TIGR01097] phosphonate ABC transporter, permease protein PhnE |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCATA CCGCCAGATT GTCCTTGCTG AGCGAACAGG GGCGCGTGAT CGAGAGCCAT
TGGAATGCGT TGGCCAAGAC CCGCCGCCTT TACACGGTAG CCGGTCTTGC CGTGTTGTTT
CTGGCGCTGG CGGGGTCGCT GTGGTTTGCC AATGATACCA ATTCGGGCAA GTTTTTCGAC
CGTCTGCCAC ATCTGTTCGA TTTCGTCGAA ACGCTCATTC CCCGCGATGG CAATGAGATC
TGGCGGGCGA TGTTCGACCT GCCATCGCCC TATGATGATG GCAGCCTGAA ATACAATTAT
CCGGAAGGGC GCTACTATCT CACCCAGACG CTTTATATCC CGGAATATTT CTACAAGATG
ATCGAGACGC TGAACATCGC GCTGGTCTCG ACCCTGCTGG GCGGCATGCT GGGCTTTTGT
TTTTCCTTCA TGGCGGCACG CAACATGATG CCGAACAGGT TCATTCGCTG GCCGGTGCGC
CGTTTTATGG AGTTGCTCAG GGCGTTCCCG GAAGTGGTGC TGGCCGGATT TTTCCTCGCC
ATCCTCTCCA TTGGCCCGAT CCCGGCGATG ATTGCGGTTT CCGTCCATAC GGTCGGCGCA
CTCGGCAAGC TGTTTTTCGA AGTGGTGGAA AATGCCGATA TGAAGCCGGA CGAAGGCCTG
CGCGCCGTTG GCGGCAATTG GCTGGAGCGG CTGTGGTTCG GCATGGTGCC GCAGGTCATG
CCGAATTTCA TCAGTTATGC CCTGCTGCGC ATGGAAATCA ATGTGCGCGC GTCGACAATT
ATCGGCGCGG TCGGCGGTGG CGGCATTGGC GAACCCTTGC GCCTGTCGAT CAGCCAGGGC
CATGCGGCAA AAACCGTTGC CATCGTCATC CTGCTGCTGA CCACGGTGAT TGCCGTCGAT
CAATTTTCGG CCTGGTTGCG CCGCAAACTG GTCGGTGAGC AAGCCTTTCA TGCTGTTTCC
TGA
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| Protein sequence | MSHTARLSLL SEQGRVIESH WNALAKTRRL YTVAGLAVLF LALAGSLWFA NDTNSGKFFD
RLPHLFDFVE TLIPRDGNEI WRAMFDLPSP YDDGSLKYNY PEGRYYLTQT LYIPEYFYKM
IETLNIALVS TLLGGMLGFC FSFMAARNMM PNRFIRWPVR RFMELLRAFP EVVLAGFFLA
ILSIGPIPAM IAVSVHTVGA LGKLFFEVVE NADMKPDEGL RAVGGNWLER LWFGMVPQVM
PNFISYALLR MEINVRASTI IGAVGGGGIG EPLRLSISQG HAAKTVAIVI LLLTTVIAVD
QFSAWLRRKL VGEQAFHAVS
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