| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0258 |
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| Symbol | |
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| ID | 7387563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 224789 |
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| End bp | 226222 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643649953 |
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| Product | ABC transporter nucleotide binding/ATPase protein (sugar/ribonucleotide) |
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| Protein accession | YP_002548168 |
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| Protein GI | 222147211 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3845] ABC-type uncharacterized transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTGACAGTGG CCAAAGGCTC GATCCATGGC ATTATCGGTG AGAACGGTGC CGGGAAATCG
ACGCTGATGT CGATCCTCTA TGGATTTTAC CAGGCAGATA GCGGCGAGAT TAAAATCGGT
GGCCAGTCCA CGGTCATTAA GGACAGCCAG GCGGCCATTT CCAGCGGCAT CGGCATGGTG
CATCAGCATT TCATGCTGGT CGAAAATTTT ACCGTGCTGG AAAATGTCAT GCTGGGTGCC
GAAGGCGGCG CTTTGCTGGC CAAGGGAACG GCAGCGGCCC GCGCCTCCCT GAAACAGCTG
GAAACGGATT ATGGGCTGGA TGTCGATCCC GATGCCGTGG TCGAGGAATT GCCGGTTGGT
CGTCAGCAGC GGGTTGAAAT TCTGAAAGCG CTGTATCGCG GCGCCGATAT TCTCATTCTC
GACGAGCCGA CAGGGGTGCT GACGCCCGCT GAGGCCGATC ATCTGTTCAA GATCCTGCGT
GTTCTGCGCG ATCAGGGCAA AACGGTTATC CTGATTACCC ACAAACTGCG GGAAATCATG
GCGATCACCG ATACGGTTTC CGTCATGCGG CGCGGCGAAA TCGTTGCCAC CCGCAAGACG
GTGGAGACAT CAGTGGAGGA ATTGGCGGAA CTGATGGTTG GCCGCCGGGT GCTGCTGCGG
GTCGACAAGC AGCCTGCACA GCCGCGAGAC GTTCTGCTGT CGGTGCGCAA CCTGACCGTC
AAGGATAGTC GCGGCGTCAT CATGGTCGAT GATGTGTCCT TCGATGTGCG CGAAGGTGAG
ATTGTCGGCA TTGCCGGTGT GGCTGGCAAT GGTCAAAGCG AGTTGCTGGA AGCGATCACC
GGCATTCGCA AGCCGATGTC GGGCGAGATC CTCATCGCTG GCAAATTGGT GACCGGTTAT
GATCCGGCCC GATTGAGAGA TCTTGGGCTT GCCCATATCC CTGAAGATCG CCACCATATG
GGCCTCGTCC TGCCCTTTGA GGAAAGCCAG AACGCTATTC TCGGCTATCA TCGTGACGAG
CGCTATGGAA AAGGCATGTT TCTCGATCCG AAGGCGATCC GCGCCGCTGC CGAGGTCGAG
ATTGCCAAAT ATGACATCCG CCCACCCAAT CCCCGCTTGA AGACGGCTAA TTTTTCCGGT
GGCAATCAGC AGAAAATCGT CGTTGCCCGC GAGATCGAGC GCGATCCGAA TGTGCTGATC
ATCGGCCAGC CGACCCGTGG CGTCGATATT GGTGCCATTG AGTTCATTCA CCGGCGCATC
GTCGAAACCC GTGACAAGGG CAAGGCGCTG CTGCTGGTCT CGGTGGAACT GGATGAAATC
CGCTCCTTGT CCGACCGCAT CCTGGTGATG TTTGCCGGCA AGGTAGTGGG CGAAAAGACG
GCAGACGCCG ATGAACAGAC GCTGGGCCTG ATGATGGCCG GCATTGCCGC TTGA
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| Protein sequence | MTVAKGSIHG IIGENGAGKS TLMSILYGFY QADSGEIKIG GQSTVIKDSQ AAISSGIGMV
HQHFMLVENF TVLENVMLGA EGGALLAKGT AAARASLKQL ETDYGLDVDP DAVVEELPVG
RQQRVEILKA LYRGADILIL DEPTGVLTPA EADHLFKILR VLRDQGKTVI LITHKLREIM
AITDTVSVMR RGEIVATRKT VETSVEELAE LMVGRRVLLR VDKQPAQPRD VLLSVRNLTV
KDSRGVIMVD DVSFDVREGE IVGIAGVAGN GQSELLEAIT GIRKPMSGEI LIAGKLVTGY
DPARLRDLGL AHIPEDRHHM GLVLPFEESQ NAILGYHRDE RYGKGMFLDP KAIRAAAEVE
IAKYDIRPPN PRLKTANFSG GNQQKIVVAR EIERDPNVLI IGQPTRGVDI GAIEFIHRRI
VETRDKGKAL LLVSVELDEI RSLSDRILVM FAGKVVGEKT ADADEQTLGL MMAGIAA
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