| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0246 |
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| Symbol | |
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| ID | 7387555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 215886 |
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| End bp | 217022 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643649944 |
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| Product | ABC transporter membrane spanning protein (peptide) |
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| Protein accession | YP_002548160 |
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| Protein GI | 222147203 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4239] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGCCG TTCCCGAACA CCTGGCCAAG CCGCCGAAAA AGCCGTTCCT GACCCCGATC
AACCGGCGGC GCCTGGAGAA CTTCAAGGCT AACCGGCGCG GCTCCTGGTC CTTCTGGATC
TTCATGGTGC TGTTCGGACT GAGCCTCTGC GCCGAGTTGA TCGCCAATGA CCGGCCGATC
ATCGCCTCCT ACAAGGGCGA GATCCTGTTT CCGGTCGCCA TCAACTATCC AGAGGAAAAA
TTTGGCGGCT TTCTGGCCGT CACCGATTAT CGCTCCAGCT TTGTATCGGA CGAGATCAAT
GCCCATGGCT GGATGATCTG GCCGCCGATC CGCTATTCCT ATCGCACTGT GAATTCGGAA
ATTCCGCAAT CGGCCCCGAC GCCGCCCTTC TGGTTGATGG ACGCCAAGCA GCGTTGCTCG
GCCTATCCGA AGGGGGCGGA TGACCCCAAT TGTATCATCG GCAACATGAA CTGGCTTGGC
ACCGACGATC AGGCCCGCGA TGTCATGGCG CGAATGATTT ACGGATTCCG CATTTCCGTG
CTGTTCGGTC TGGCGCTGAC GATGATTTCC GCCGTGATCG GCGTGTCCGC CGGTGCGGTG
CAAGGCTATT TCGGCGGCAA GACCGATCTG CTGATGCAGC GGTTCATCGA GATCTGGTCA
TCGATCCCGC TGCTTTATAT CCTGCTGATC ATCGCCTCGC TGCTGCCGCC GGGCTTCTTC
ATTCTGCTTG GTATCATGCT GCTGTTCACC TGGGTGCATT TCGTCGGCAT TGTACGGGCG
GAGTTTCTGC GGGCCAGAAA TTTTGAATAT GTGAACGCCG CCCGGGCGCT TGGGGTTGGC
AATTGGACGA TCATGCGCCG CCATCTGCTG CCCAATGCCA TGGTGGCGAC CTTGACCTTC
CTGCCCTTCA TCCTGTCGGG ATCGATCACC ACCCTGACCT CGCTGGATTT CCTCGGTCTC
GGCATGCCGC CCGGCTCGCC TTCGCTGGGT GAGCTGATTG CCCAGGGCAA GCGCAATCTG
CAAGCGCCCT GGCTGGGGCT GACGGCCTTC TTCACCATGG CGATCATGCT GTCCCTGCTT
ATTTTCGTCG GCGAGGCGGT GCGCGATGCC TTTGATCCGA GGAAGACCTT CAAATGA
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| Protein sequence | MAAVPEHLAK PPKKPFLTPI NRRRLENFKA NRRGSWSFWI FMVLFGLSLC AELIANDRPI
IASYKGEILF PVAINYPEEK FGGFLAVTDY RSSFVSDEIN AHGWMIWPPI RYSYRTVNSE
IPQSAPTPPF WLMDAKQRCS AYPKGADDPN CIIGNMNWLG TDDQARDVMA RMIYGFRISV
LFGLALTMIS AVIGVSAGAV QGYFGGKTDL LMQRFIEIWS SIPLLYILLI IASLLPPGFF
ILLGIMLLFT WVHFVGIVRA EFLRARNFEY VNAARALGVG NWTIMRRHLL PNAMVATLTF
LPFILSGSIT TLTSLDFLGL GMPPGSPSLG ELIAQGKRNL QAPWLGLTAF FTMAIMLSLL
IFVGEAVRDA FDPRKTFK
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