| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0245 |
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| Symbol | |
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| ID | 7387554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 214795 |
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| End bp | 215886 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643649943 |
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| Product | ABC transporter membrane spanning protein (peptide) |
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| Protein accession | YP_002548159 |
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| Protein GI | 222147202 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4174] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCGCCT ATATCCTGCG CCGCCTGCTG TTGATGATCC CGACCATGGT TGGCATCATG
GGCATTTCCT TTCTGGTCAT CCAGTTTGCC CCCGGTGGTC CGGTGGAACA GGTGGTGGCG
CAGCTGAGCG GACAGGGAGA CAGCGCCGAC CAGCGGCTTT CCGGTGGTGG CGATATCGTC
AGCCAGGGCG GCATGGGCGA TGGCGGCTCG AACTATCGCG GTGCGCAGGG GCTGGACCCG
GATCTGATCA AGAAACTGGA GAAGCAGTTC GGCTTCGACA AGCCGCCACT CACCCGGTTT
CTTGACATGA TGTGGAATTA TATCCGCTTC GATTTCGGCG AGAGCTTCTT CCGCAACACC
TCGGTAATCG ACCTGATTGT CGAGAAAATG CCGGTCTCGA TCTCGCTCGG CGTCTGGGTT
CTGTTGCTGT CCTATGCGAT TTCCATTCCG CTCGGCATCC GCAAGGCCGT TAAGGACGGC
TCGACCTTTG ATGTCTGGAC CTCCGGCATC GTCGTGGTCG GTTATGCTGT GCCGGGCTTC
CTGTTCGGCA TTCTGCTAAT CGTGCTGTTT GCCGGTGGCT CCTTCTACAA TTGGTTTCCG
CTGCGTGGCC TGACTTCCGA TAATTTTGCC GATCTCAGTT GGTGGCAGAA GATCCTCGAT
TATTTCTGGC ATCTGACCCT GCCGCTGACC GCATTGCTGC TTTCGGCCTT TGCCACCACG
ACACTGCTCA CCAAGAATTC CTTCATCGAC GAGATCAAGA AGCAATATGT GGTAACGGCC
CGTGCCAAGG GCCTCAGCGA ACATCGGGTG CTGTACGGCC ATGTGTTTCG CAATGCCATG
CTGATTGTCA TTGCCGGTAT TCCCGGCGCT TTCGTCTCGG CCTTCTTCAC CGGTTCGCTG
CTGATCGAGA ATATCTTCTC GCTGGATGGC CTGGGACGTC TCGGCTATCT GTCGATCATC
AACCGCGATT ATCCGATTGT GTTTGCCACG CTTTATATCT TCTCGCTGCT GGGCCTGGTG
GTCAGCCTCG TCTCGGATTT GATCTATACC TGGATCGATC CCCGCATTGA TTTTGACCGG
AGGGATGTCT GA
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| Protein sequence | MGAYILRRLL LMIPTMVGIM GISFLVIQFA PGGPVEQVVA QLSGQGDSAD QRLSGGGDIV
SQGGMGDGGS NYRGAQGLDP DLIKKLEKQF GFDKPPLTRF LDMMWNYIRF DFGESFFRNT
SVIDLIVEKM PVSISLGVWV LLLSYAISIP LGIRKAVKDG STFDVWTSGI VVVGYAVPGF
LFGILLIVLF AGGSFYNWFP LRGLTSDNFA DLSWWQKILD YFWHLTLPLT ALLLSAFATT
TLLTKNSFID EIKKQYVVTA RAKGLSEHRV LYGHVFRNAM LIVIAGIPGA FVSAFFTGSL
LIENIFSLDG LGRLGYLSII NRDYPIVFAT LYIFSLLGLV VSLVSDLIYT WIDPRIDFDR
RDV
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