| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0244 |
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| Symbol | |
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| ID | 7387553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 212727 |
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| End bp | 214622 |
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| Gene Length | 1896 bp |
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| Protein Length | 631 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643649942 |
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| Product | ABC transporter substrate binding protein (peptide) |
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| Protein accession | YP_002548158 |
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| Protein GI | 222147201 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGTCA TCCGCGCCGG GGCAAAAATA CGCGCATTGT TTTTGGGTCC ATTGCTTCTG
GGTCTTTGCG CCGCACAGAG CTTGACCACC CAGGCTTTCG CAGAGGAACC CCAATGGCGC
CACGCCATCG GCTTGATCGA CGCTCCGAAA TATCCCGAGG GTTTTCAACG CTTCGACTAT
GTCAATCCGG ATGCGCCGAA GGCGGGTGAG TTGAAACTGT CGTCGTTCGG CAGCACCTTC
GATACGTTCA ATCCGATCGC GGGCAAGGGG CAGTTGGCAG ATGGTGTCCA GGTGCTGCTG
TCGTCGCCCC CTGGTGCATC GCTTGTGACC GAAACCCTGC TCAAATCCTC GCTCGATGAG
GATGGTGTCA GCTACGGTCT TCTGGCGGAG GCGCTCGCCT ATCCCGATGA CGTTTCCTAT
GTGAAATTTC GGCTGCGGCG TGAGGCCAAA TGGGCGGATG GCCAGCCCGT CACCCCGGAT
GATGTTGTTT TCAGTTTCGA TGCCGTCAAG CAGCTCAATC CGGCGGCTGC GATCTATTAT
AATCATGTTG TGAAGGCTGA AAAGACCGGT GAACGGGAAA TCACGTTCAC GTTCGATCAG
AAAGGCAACA AGGAACTGCC TTCGATTGTC GGGCAACTCG ACGTCGTTCC AAAGCATTGG
TGGCAAGGCC AGGGACCCGA TGGCAAGCCG CGTGATATCT CCAAGACAAC GCTTGAGCCG
ATCATGGGAT CTGGTCCCTA TCGCATCGCC GGGTTTTCGC CAGGTGGATC GGTGCGCTAC
CAATTGCGGG ATGACTATTG GGGCAAGGAT ATCAACGTCA ACATCGGCTA CAATAATTTC
CGCAGTATAT CCTACACCTA TTATACCGAT ATCAATGTCG CATTCGAAGG TTTCCGTTCT
GGCGCGACCG ATTTGTGGCT TGAAAATTCC GCCATGCGCT GGACCAAGTC CTACGATTTT
CCGGCTGCCG TCCAAGGCAG GATCAAGCGC GAGCAGATCC CGAACGATTA CCGCAAAGCC
GGCTTGATGA TGGGCTTCTT CCTCAATACG CGGCGGGAGC AGTTCAAGGA TGTGAATGTC
CGCAAGGCGC TGAACTACGC TTTCGATTTC GAGGAACTGA ACCGCACGGC GTTTTTCGGG
CTCTACAAGC GAATCGACAG CTATTTCTAT GGCAATGACC TGGCCTCCAG CGGCTTGCCT
GATGGTAAGG AGTTGGAGAT CCTAAACGGG ATCAAGCAAT ATGTGCCGCC GGAGGTGTTC
TCCACGGTCT ATAAAAATCC GGTCAGTGGA GACCCCGCAA AGCAGCGTGA CAATCTGCGC
ATGGCCATTT CGCTTTTCGC CAAGGCAGGC TACGAATTGC GCGGCAACCG GATGGTGTCC
AAGGCCACCG GCAAACCTTT CACGTTCGAA ATTTTGCTGG ATGGTCCACT CATCGAGCGG
GTGGCATTGC CCTATGCCAA TAATCTGAGA AAAATCGGCA TCGAGGTCAA TGTCCGAAGC
GTCGATTCCT CCCAATTCAC CAGCCGTTTG CGCAGTTTCG ATTATGATGC CGTTTATTAT
GTCGCCTCGC AATCCACCAA TCCAGGCAAT GAGCAGCGCG ACTACTGGGG GTCGGCCAGT
GCCGACACCA CCGCTTCGCG CAATTATGCT GGCATTAAAA ACCCGGGCAT CGATGCCTTG
ATCGACCAGA TTATCTTTGC GAAAGACCGT GACACGCTGA TGGCGACCGT TCATGCGCTC
GACCGGATGC TGCTTGCTGG AGCCTATGTC GTGCCGTTTT ATACCCGCGG TGATGTGTGG
TTTGCCTATT GGGACAAGTT TGCGCATCCG CAAAACCTGC CGGAATTTTC CAGCGGCTTC
CCCGATATCT GGTGGGCAAA GCAAGTGTCG AATTGA
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| Protein sequence | MAVIRAGAKI RALFLGPLLL GLCAAQSLTT QAFAEEPQWR HAIGLIDAPK YPEGFQRFDY
VNPDAPKAGE LKLSSFGSTF DTFNPIAGKG QLADGVQVLL SSPPGASLVT ETLLKSSLDE
DGVSYGLLAE ALAYPDDVSY VKFRLRREAK WADGQPVTPD DVVFSFDAVK QLNPAAAIYY
NHVVKAEKTG EREITFTFDQ KGNKELPSIV GQLDVVPKHW WQGQGPDGKP RDISKTTLEP
IMGSGPYRIA GFSPGGSVRY QLRDDYWGKD INVNIGYNNF RSISYTYYTD INVAFEGFRS
GATDLWLENS AMRWTKSYDF PAAVQGRIKR EQIPNDYRKA GLMMGFFLNT RREQFKDVNV
RKALNYAFDF EELNRTAFFG LYKRIDSYFY GNDLASSGLP DGKELEILNG IKQYVPPEVF
STVYKNPVSG DPAKQRDNLR MAISLFAKAG YELRGNRMVS KATGKPFTFE ILLDGPLIER
VALPYANNLR KIGIEVNVRS VDSSQFTSRL RSFDYDAVYY VASQSTNPGN EQRDYWGSAS
ADTTASRNYA GIKNPGIDAL IDQIIFAKDR DTLMATVHAL DRMLLAGAYV VPFYTRGDVW
FAYWDKFAHP QNLPEFSSGF PDIWWAKQVS N
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