| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0240 |
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| Symbol | mgsA |
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| ID | 7387551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 210963 |
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| End bp | 211343 |
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| Gene Length | 381 bp |
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| Protein Length | 126 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643649940 |
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| Product | methylglyoxal synthase |
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| Protein accession | YP_002548156 |
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| Protein GI | 222147199 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1803] Methylglyoxal synthase |
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| TIGRFAM ID | [TIGR00160] methylglyoxal synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.822912 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTGAGC GCCAGAAGAT TGCGCTGATC GCGCATGACA AGATGAAGGA CGAGATGGCG
GCGTTTGCCC GCCATCATCA GCGTTTTCTT GAGCAATGGC AGATTGTCGC CACCGGCACG
ACCGGCGCAC GGGTGCACGA CGCCTGCCCG AAATTGGACG TTCTCAGGAT GAAAAGCGGC
CCTCTGGGCG GCGACCAGCA AATCGGCGCA ATGATTGCCC AGGAAGAGGT CGCCATGCTG
ATCTTCTTCG TCGATCCCCT CACCCCCATG CCCCATGATG TCGATGTCAA GGCGCTGATG
CGACTGGCTA TTCTTTACGA TACACCGATG GCGCTCAACC GGGCGACGGC TGACCGTCTG
TTGCCCGTGA TCACGGAATA A
|
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| Protein sequence | MAERQKIALI AHDKMKDEMA AFARHHQRFL EQWQIVATGT TGARVHDACP KLDVLRMKSG
PLGGDQQIGA MIAQEEVAML IFFVDPLTPM PHDVDVKALM RLAILYDTPM ALNRATADRL
LPVITE
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