Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0222 |
Symbol | ctpA |
ID | 7387537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 198997 |
End bp | 199182 |
Gene Length | 186 bp |
Protein Length | 61 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 643649926 |
Product | component of type 4 pilus pilin subunit protein |
Protein accession | YP_002548142 |
Protein GI | 222147185 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3847] Flp pilus assembly protein, pilin Flp |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCCAAGA TTTTCTCACG TTTTATGAAG GATGAATCCG GTGCAACGGC CATCGAATAC GGCCTGATCG CCGCTCTGAT TTCCGTGGCA CTCGTCGCTG GCGCGACCAC GCTCGGTACG AGCATTGGCA ACACCTTTAA TAATCTGACA ACGCAGATGA ATAAGGGTGC GGACGCAACC AAGTAA
|
Protein sequence | MSKIFSRFMK DESGATAIEY GLIAALISVA LVAGATTLGT SIGNTFNNLT TQMNKGADAT K
|
| |