| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0210 |
|---|
| Symbol | |
|---|
| ID | 7387527 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | - |
|---|
| Start bp | 188499 |
|---|
| End bp | 188942 |
|---|
| Gene Length | 444 bp |
|---|
| Protein Length | 147 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643649915 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002548132 |
|---|
| Protein GI | 222147175 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.434123 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGGTT TTAGTGTGAG GAGGCGTAGA ATGCCATTGT TCCGCAATGC CTTGGCTGGG
GTTGCGTTCG TCCTTGTCGG CAGCCTGCCC GCTGTCGCCT CGGCGACCAT GCCGTTTGCC
GTGGACCCGC TCAGCGGCAA CCCATCCCGA GTGATCGATA TCCGCTATGT CTGCGACGTC
TATGGTTGTT ATGACCGGCC CGATTACGGC AGGCCGCCAC CGCCGCCGCC AGGCTATTAC
CGGCCAGTCC CACCGCCGCC GCCACCCGGC TACTATCGCC CAGCACCTCC ACCACCGGGT
TACTACCGTC CAGCGCCACC GCCGCGGGTA TCGAACCGCC ATGTCCGCTG GTGCATGGAC
CGTTATCGGT CCTATGATCC ACAAACCAAC CGCTATATTG CCGGGGATGG CCGCATGCGG
GTCTGCCGCT CACCATTCCG ATGA
|
|---|
| Protein sequence | MSGFSVRRRR MPLFRNALAG VAFVLVGSLP AVASATMPFA VDPLSGNPSR VIDIRYVCDV
YGCYDRPDYG RPPPPPPGYY RPVPPPPPPG YYRPAPPPPG YYRPAPPPRV SNRHVRWCMD
RYRSYDPQTN RYIAGDGRMR VCRSPFR
|
|---|
| |