Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0200 |
Symbol | infC |
ID | 7387520 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 179359 |
End bp | 179814 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643649908 |
Product | translation initiation factor IF-3 |
Protein accession | YP_002548125 |
Protein GI | 222147168 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0290] Translation initiation factor 3 (IF-3) |
TIGRFAM ID | [TIGR00168] translation initiation factor IF-3 |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATTGACG CAGAAGGCCA GAATCTCGGC GCCGTGCCGA CGGACCAGGC GCTCCGCATG GCGGAAGAAG CCGGTCTCGA TCTGGTCGAA ATTTCGCCGA ATGCTGAACC GCCCGTTTGC AAGATCCTGG ACCTTGGCAA GCTGAAATAC GCCAACCAGA AGAAGGCGGC AGAAGCGCGC AAGAAACAGA AAATCGTTGA AGTCAAAGAA ATCAAGATGC GCCCGAACAT CGACACCCAT GACTATGAGG TGAAGATGAA GTCGATGTCG CGGTTCTTTG AAGACGGCGA TAAGGTCAAG GTCACCCTGA AGTTCCGTGG CCGCGAAATG GCCCACCAGG AACTGGGCAT GAAATTGCTC ATGCAGGTGA AGGAAGACAC AGTCGAAGTT GCCAAGGTTG AAGCTGAACC CAAGCTCGAA GGTCGTCAGA TGATGATGGT GCTGGCCCCT AAATAA
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Protein sequence | MIDAEGQNLG AVPTDQALRM AEEAGLDLVE ISPNAEPPVC KILDLGKLKY ANQKKAAEAR KKQKIVEVKE IKMRPNIDTH DYEVKMKSMS RFFEDGDKVK VTLKFRGREM AHQELGMKLL MQVKEDTVEV AKVEAEPKLE GRQMMMVLAP K
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