Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0193 |
Symbol | cmk |
ID | 7387515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 173741 |
End bp | 174394 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643649903 |
Product | cytidylate kinase |
Protein accession | YP_002548120 |
Protein GI | 222147163 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0283] Cytidylate kinase |
TIGRFAM ID | [TIGR00017] cytidylate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGACTGAGG TGACGGAAAA CACGTTTGTA ATCGCCATCG ATGGTCCTGC GGCTGCGGGC AAGGGAACGC TGTCACGCCG GATCGCCGAC AGTTACGGCT TTCATCATCT GGACACGGGC CTGACCTACC GCGCCACAGC CAAGGCGCTT TTGGAAAAAA GCCTGCCGCT CGATAATGAG GCTGTGGCCG AGCAGGTGGC GCTGGGGCTC GATCTTTCCG GTCTGGACCG GGAGGTTCTG GCCAAGCACG ATATCGGTGA GGCGGCGTCG AAAATCGCCG TCATGCCCGC GGTGCGTCGC GCTCTGGTCG AGGCGCAGCG ACGGTTTTCG CTGAAAGCCC CCGGTGCGGT CCTGGACGGG CGCGATATCG GCACGGTTGT CTGCCCGGAT GCGGCGGTTA AGCTCTATGT CACGGCCTCT CCGGAGGTGC GCGCCCGGCG TCGCTTTGAC GAGATTGTCG CCCATGGTGG CGTGGCTGAT TATCCCGCAG TTTTTGAGGA TGTGAAGCGG CGCGACGACC GCGACATGGG CCGCGCCGAC AGTCCGTTGA AACCTGCTGA AGACGCGCAC TTGCTAGATA CGTCCGAAAT GAGTATAGAG GCGGCGTTTC AGGCCGCGCG TTCCTTGATC GATGCGGCAT TGAAAAACAA TTAG
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Protein sequence | MTEVTENTFV IAIDGPAAAG KGTLSRRIAD SYGFHHLDTG LTYRATAKAL LEKSLPLDNE AVAEQVALGL DLSGLDREVL AKHDIGEAAS KIAVMPAVRR ALVEAQRRFS LKAPGAVLDG RDIGTVVCPD AAVKLYVTAS PEVRARRRFD EIVAHGGVAD YPAVFEDVKR RDDRDMGRAD SPLKPAEDAH LLDTSEMSIE AAFQAARSLI DAALKNN
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