| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0173 |
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| Symbol | rpsO |
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| ID | 7388335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 162080 |
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| End bp | 162349 |
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| Gene Length | 270 bp |
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| Protein Length | 89 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643649891 |
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| Product | 30S ribosomal protein S15 |
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| Protein accession | YP_002548109 |
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| Protein GI | 222147152 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0184] Ribosomal protein S15P/S13E |
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| TIGRFAM ID | [TIGR00952] ribosomal protein S15, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.401011 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCGATTA CCGCAGAGCG CAAGTCAGCC CTCATCAAGG AATACGCAAC CAACGAAGGC
GACACTGGTT CGCCGGAAGT CCAGGTCGCT ATCCTGACCG AGCGGATCAC CAACCTGACC
GAGCACTTCA AGGGCCACAA GAAGGACAAC CACTCTCGTC GTGGCCTTCT GACGCTGGTA
TCCACCCGCC GTTCGCTTCT TGATTATCTG AAGAAGAAGG ACGAAGGCCG TTACAGCAAG
CTGATTGCGA GCCTCGGCAT TCGCCGCTAA
|
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| Protein sequence | MSITAERKSA LIKEYATNEG DTGSPEVQVA ILTERITNLT EHFKGHKKDN HSRRGLLTLV
STRRSLLDYL KKKDEGRYSK LIASLGIRR
|
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