| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0161 |
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| Symbol | |
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| ID | 7388326 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 148858 |
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| End bp | 149907 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 643649882 |
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| Product | hypothetical protein |
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| Protein accession | YP_002548100 |
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| Protein GI | 222147143 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4421] Capsular polysaccharide biosynthesis protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCTGA ATGTCGCGTC CGCTGAAGTG CGTTCCTGGA TACCTGTAAT TCAAGTTGCC
GCCGGTGCTA CGGTTGGCAA AGTTCTTGAT GCATTTCGTC TGCAAATTCC ACTTGGCTAC
AATAGCCCGG AAATCACATT TCGCAGACTT GGGAGATCCT TCATTCTGGG CTGGTGTGCT
GCGATAAAGT CGGAAAATTT CGGTGAAATC GAAGACACAT TGTATGCCGT ATATCCACCT
ATATTTGATG AATTGATTCC TAAGAATGCA AATATATCAC GCATATCTGA TATATCGCCA
CTTATCATTG GTAATGGTTG GTACAAAAAC TATTATCATT GGACGTTACA GGCTATCGGC
TGTCTGTTGA TTTATAAAAA ACATCGCGAT GACGGTAATA TTTTATTGGC AATGCCGCGT
CTGAATGGGT GGAGGAATGA AGCCCTTTCG CTCACCGGAT TTAATGGGCA ATTGCTTGAG
ATGGACTATC ACCATTTTCT GCATGTAGAC GACTGCATCA CCAGCAATCT GACCGGCGGC
GGCTTTGCCC ACCTCCCCCA TCCAGCCGTT ATGGCTGAAT TCGAGGCCCT TGCGGCACGT
GTCACGATTG AGCGCCGGTT CAGCCGCAAG ATCTATGTTT CGCGCCTGGA TGCGGGCGAT
GTGCGTCGGG TTGTCAATGA GAAGGCCGTC TGCACGTTGC TTGAAAGCCG TGGATTTGAA
ATCATCACAC CTGGTGAGCT TTCCGTAAAG GAACAGGTCG TGGCTTTCCG CGATGCCGAG
GTCATTGTTG CCCCGCATGG CGCGGGCCTG GCAAATCTTG TCTATTGCCA ACCGGGTATC
AAAACCAGGG TTATTGAACT GTTCCAGGCG AGTTGCATCA ATGCCTGCTA TGCAAGAGTT
TGTCAGGCGA AAGGGCTGGA TTATACGGCA ATCATCAATC CTGATAGGCC CGGGCAGGAC
GCGGATGGGA CGCTGAAAGA GATCAAGACC AGAAACGACA TGTGGCAGAT CGTCGATCTT
GCTCTGCTGG AAAAAGTCTT GATTGAATGA
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| Protein sequence | MTLNVASAEV RSWIPVIQVA AGATVGKVLD AFRLQIPLGY NSPEITFRRL GRSFILGWCA
AIKSENFGEI EDTLYAVYPP IFDELIPKNA NISRISDISP LIIGNGWYKN YYHWTLQAIG
CLLIYKKHRD DGNILLAMPR LNGWRNEALS LTGFNGQLLE MDYHHFLHVD DCITSNLTGG
GFAHLPHPAV MAEFEALAAR VTIERRFSRK IYVSRLDAGD VRRVVNEKAV CTLLESRGFE
IITPGELSVK EQVVAFRDAE VIVAPHGAGL ANLVYCQPGI KTRVIELFQA SCINACYARV
CQAKGLDYTA IINPDRPGQD ADGTLKEIKT RNDMWQIVDL ALLEKVLIE
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