| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0128 |
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| Symbol | |
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| ID | 7388302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 117612 |
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| End bp | 118559 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643649858 |
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| Product | permease |
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| Protein accession | YP_002548076 |
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| Protein GI | 222147119 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0679] Predicted permeases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.20856 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGAAA TCACCTTGAA TGTCCTGCCG ATTTTCCTGC TGATTTTTTC CGGCTGGGCG
CTGGTGCGCA GCCGGTTCCT GAACGTGGAT ATCGGTGATG CCTTAAGCGA ATTTGTTTTC
AAGGTCGCGG TGCCGGTTCT GCTGCTGCAT ACGATTACCC AGGCTGATTT TCAGGGTGCA
TCGCCTTTTC GTTTGTGGAT TGCCTATTTT GCCGGAGTAG GTGTCACCTG GACCATCGGC
CATCTCGTGG CGACACGGGT TTTTGGCCGC GACCAGCGGA TCGGTGTGCT GGCCGGGGTA
TCCTCAGCCT TTGCCAATAA TGTTTTCATC GGCCTGCCCT TGGTCAGCCG CATGCTTGGC
AATGACGGTG TTGTTGCTCT GTCCATTCTG CTGGCCGTGC ACCTGCCATT GATGATGGTG
ATCGGCACGG TCTTGATGGA ACATGCCGAG CGCCGGGAAA GCGGGGTGCA ATTGCGGGGA
ATGCTCGCCG TCTTGCGCCA GGTCGGGCGC AATCTTGTCA CCAATCCGCT GGTGATTGGC
CTTGCCATCG GACTTATGGT GCATGTGATC GGCCTGCCGA TCCCGGCGAC GATTGAGACC
GTGCTCAGTC AGATCTCCGC CATGGCTGGG CCGGCGGCGC TGATTTCGCT GGGCATGGCT
CTTACCAAAT ATCGTGTCAC CGGCAATGTC GGTATTGCCA GCGTTACCTC GGCCCTGAAA
TTGGTCCTGA TGCCCGCATC CGTGTGGATG GCCTGCCACC TTCTGCATTT GCCGCATGAA
TGGACCATGG CGCTTGTGCT GACGTCTTCC GTGCCGACGG GCGTTAACGC CTGGCTGATC
GCCAATCGGT TTGGGGTCGG CCATGCGCTG GCCGCCTCGA CCATCACCAT TACAACAGCA
CTTGGTGTGT TTTCCGTCAC GTTCTGGGCG TGGCTGCTGG GCGCGTGA
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| Protein sequence | MTEITLNVLP IFLLIFSGWA LVRSRFLNVD IGDALSEFVF KVAVPVLLLH TITQADFQGA
SPFRLWIAYF AGVGVTWTIG HLVATRVFGR DQRIGVLAGV SSAFANNVFI GLPLVSRMLG
NDGVVALSIL LAVHLPLMMV IGTVLMEHAE RRESGVQLRG MLAVLRQVGR NLVTNPLVIG
LAIGLMVHVI GLPIPATIET VLSQISAMAG PAALISLGMA LTKYRVTGNV GIASVTSALK
LVLMPASVWM ACHLLHLPHE WTMALVLTSS VPTGVNAWLI ANRFGVGHAL AASTITITTA
LGVFSVTFWA WLLGA
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