| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0110 |
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| Symbol | dnaX |
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| ID | 7387990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 105085 |
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| End bp | 106980 |
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| Gene Length | 1896 bp |
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| Protein Length | 631 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643649845 |
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| Product | DNA polymerase III subunits gamma and tau |
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| Protein accession | YP_002548063 |
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| Protein GI | 222147106 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
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| TIGRFAM ID | [TIGR02397] DNA polymerase III, subunit gamma and tau |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.801093 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGATC TGGAACCAAC AGCACAAGCT GCTCCCGCGT CCGGCCAAGC CTCCGGTGCT
TACCGGGTTC TGGCGCGCAA ATATCGCCCC AAGGATTTCA CGGACCTGAT GGTCGGCCAG
GAGCCGATGG TCCGCACCCT CACCAATGCG TTCGAGACGG GCCGGATTGC CCAGGCCTAT
ATGCTGACAG GCGTGCGCGG GGTCGGCAAG ACCACGACCG CCCGCATTCT CGCCCGTGCG
CTGAACTACA AGACCACTGA GATTGACCGC CCGACCATCG ACCTGAAAAT CCCCGGCGAG
CATTGCCAGG CGATCATGGA AGGCCGCCAT GTCGATGTGA TCGAGATGGA TGCCGCCTCC
CATACCGGTA TCGACGACAT CAGGGAAATC ATCGAGCAGG TACGCTACCG CCCGGTATCG
GCCCGCTACA AGGTCTATAT TATCGACGAA GTGCATATGC TCTCCACCGC TGCCTTCAAC
GGTTTGTTGA AGACACTGGA AGAGCCGCCG GAACACGTCA AATTCATCTT CGCCACCACT
GAAATCCGCA AGGTGCCGAT CACGGTGCTG TCACGCTGCC AGCGCTTCGA TCTGCGCCGC
ATCAGCGCTG GCGATCTCGT CGGGCTGTTT TCCACCATTC TCTCCAAGGA AAATATCGAG
GCGGAAGACG AGGCGCTGGC AATGATCGCC CGTGCCGCCG AGGGTTCAGC CCGTGACGGA
CTTTCCTTGC TCGATCAAGC CATTGCCCAT GGGGCAGGGC GGGTCGAAGC AGATGCCGTG
CGCTCCATGC TGGGTCTGGC CGACCGCGCC CGGGTGGTCG ATCTGTTTGG CCATATCGTG
CTCGGCGATG TCGCCGCAGC GCTTTCGGAA TTCAACAGCC AATATGAAGC CGGCGCCAGC
CCAAGCGTGG TGCTGACAGA TCTTGCTGAT TTTACCCATC TGGTGACGCG GCTGAAATAT
GTACCCAATG GTGCCAATGA CCCGTCGCTG AGTGAAGTCG AGCGGGTGCG GGGGGCGGAC
TACGCCGAGA GCGTTGCCGT CACCACGCTG TCGCGCATCT GGCAAATGTT GCTCAAGGGC
ATTCCCGAGG TGGAAAACGC CTCCCGTCAG GCCGGTGCCG CCGAAATGGT GCTGATCCGG
CTGGCCCATG CCGCCCATCT GCCGTCGCCG GAAGAAGCGG CGCGCCGCCT GCTGGACATG
GCACAGGATG GCGGGGGTGC CCCGCAGGGG ACCAGTCCCA GAGGCGGTAA TGGCGGTGGC
GCATCGGCCA GCTATGGCGG GCAGGCGGTG GCGCGGGCGT CGAGCGATCC GGCCCCACGT
GCATTAGGCC AGACCCAGCC GACCGCGCAT TTGCAGGTGG TTCCCAAGGC ATCACCGTCG
CCTGACATTG CCGCCCGCCC GGAGACAAAA CCTGAGATCC AACCGGATGT GCCCGAGCCC
AAGGTTCCCG TGCGGTCGCT GGATGACATC GTCCATCTCT GCACTGCAAA CCGCGATCCG
AAGCTGAAAG CTTTGACCCG CGCCTATGTG CGGCTGGTCA AGCTGGAAAA CGGCCGGCTG
GAGATTAATC TGCCGCCGGA GGCACCGAAA TCGCTGGTTG GTGATCTGCA AAAGCGGCTG
GAGGAATGGA CCGATATCCG CTGGATGGTC ATCCTCAGCC GCGAGCCGGG GGAAAAGACC
CTGGCCGAGC AGGAAAAGAG CGATCACGAA GCGCGGATGA CCGATGCAGC CGCCGATCCG
GATGTGATGG CGATCCTGTC GCGCTTTCCC GGTGCGAAAA TCACCGACGT GCGCATCCGA
ACCGTCACGG AGGAAGAGGA CGAGGCCCTG CCGCCGCCAG CGGCCGCCGA ATCCGCCGAG
GGCGATATTC TTCCTGGAGA CGATATCGAG TTTTAG
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| Protein sequence | MSDLEPTAQA APASGQASGA YRVLARKYRP KDFTDLMVGQ EPMVRTLTNA FETGRIAQAY
MLTGVRGVGK TTTARILARA LNYKTTEIDR PTIDLKIPGE HCQAIMEGRH VDVIEMDAAS
HTGIDDIREI IEQVRYRPVS ARYKVYIIDE VHMLSTAAFN GLLKTLEEPP EHVKFIFATT
EIRKVPITVL SRCQRFDLRR ISAGDLVGLF STILSKENIE AEDEALAMIA RAAEGSARDG
LSLLDQAIAH GAGRVEADAV RSMLGLADRA RVVDLFGHIV LGDVAAALSE FNSQYEAGAS
PSVVLTDLAD FTHLVTRLKY VPNGANDPSL SEVERVRGAD YAESVAVTTL SRIWQMLLKG
IPEVENASRQ AGAAEMVLIR LAHAAHLPSP EEAARRLLDM AQDGGGAPQG TSPRGGNGGG
ASASYGGQAV ARASSDPAPR ALGQTQPTAH LQVVPKASPS PDIAARPETK PEIQPDVPEP
KVPVRSLDDI VHLCTANRDP KLKALTRAYV RLVKLENGRL EINLPPEAPK SLVGDLQKRL
EEWTDIRWMV ILSREPGEKT LAEQEKSDHE ARMTDAAADP DVMAILSRFP GAKITDVRIR
TVTEEEDEAL PPPAAAESAE GDILPGDDIE F
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