Gene Avi_0099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0099 
Symbol 
ID7388281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp96572 
End bp96853 
Gene Length282 bp 
Protein Length93 aa 
Translation table11 
GC content62% 
IMG OID643649837 
Producthypothetical protein 
Protein accessionYP_002548055 
Protein GI222147098 
COG category[S] Function unknown 
COG ID[COG5477] Predicted small integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00804392 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCTGT CATGGATGGC CTGGACCACG CCCACGGCGC TGTTCTTCAT CACCATTCTC 
GCCCTGCTGA TCGCCCTGTC GGTCTGGGAA TATGTTTCGC CCGGCGGCAG TCCCCGCGTC
GGCATTCTGC GGTTCGAGAC GACACGCGGC GACAGGCTGT TCGTGTCCCT GCTCGGCTCC
GCCTTCATTC ATCTCGCATG GTTGGGGCTA TCCAGTCTCA GCCTGTGGTG GGCTCTCGGC
CTTTCGGTCA TCTACGCCAT CGGCGTGTTC CGGACGGTTT AA
 
Protein sequence
MNLSWMAWTT PTALFFITIL ALLIALSVWE YVSPGGSPRV GILRFETTRG DRLFVSLLGS 
AFIHLAWLGL SSLSLWWALG LSVIYAIGVF RTV