| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0072 |
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| Symbol | |
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| ID | 7389062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 71167 |
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| End bp | 72198 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643649811 |
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| Product | transcriptional regulator LacI family |
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| Protein accession | YP_002548029 |
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| Protein GI | 222147072 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGTAA GGACCGAAGA TGCGGGGCGT CTGGGACGCG TGACAATTCT CGATGTTGCG
TCGGCTGCCG GTGTCTCAAA ATCGACGGTA TCGCGCATTC TCGACGAACG GCTTCCCCGA
TCTGATAACG AAACGGCTCG CCGCGTCCGC AAGATTGCAG AAGAGCTGGG ATATGTGCGG
GATATCTCAG CGGCGAGCTT GAGGCGCGGC AGCACGATGA CTGTCGGCAT CATCGTGCCC
CGCTTGACCG ATACGGTCAT GGCCATGCTT TACGAATCGC TGGCCAAGGC CTGTAGCAGA
AGCGGTCGCT TTGCAATTGT CGCGACAACC GATGACAAGC CCAGGGCCGA CAGGCTTGCT
GCTGAATCAC TTTTGAACCG CGGAGTGGAT GGGCTCATCC TTTCGACAGC GCGGTTGGAT
GATGATTTTG CTGACGACCT CATCGCTCGG GGAATACCCC ATGTCTTCGC TCTTCGCACG
GCTGGGGCAA GCCTCTGTTC CGTTGGCGAT GACAGGTTGG GCGGATACTT GGCAACACGC
CACCTGATAG ACCTGGGCCA TCGTCATATT GGGGTGATTG CAGGACCATC TTATGCTTCC
AGCGCGGTTG GGCGGGTGGA AGGCTACAGG CAGGCAATGC AAGAAGCAGG AATTCCGGTC
TTTCCAGAGG CAATCGTTCC GTCGACCTTC GGGATCGACG CCGGTGCGGA AGCCGCTGAA
TATCTGATGC GGCTGGATAA CCGTCCGACA GCAATCTTTG CCGTCAACGA CAACACGGCT
ATCGGTGCGC TCTCAGGCCT TTCGCGCCTC GGAGTTTCCG TACCCAAAGA GGTTTCCGTG
GTCGGATATA ATGACATTCC GATCGTCAAT CATCTCCCCA CCCCGCTGAC AACGGTTCGG
GTTCCCTTCG ACCAGATCGC ATCGCATGCT TTGGATCTAT TGCTGAGTGA GACGGTTTCG
GCTGAAGACA GGATACGGAT CTCGGCCCCA ACGCTTATTC CGCGCAAATC GACTGCTAAG
CCGGCGCTGT AG
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| Protein sequence | MNVRTEDAGR LGRVTILDVA SAAGVSKSTV SRILDERLPR SDNETARRVR KIAEELGYVR
DISAASLRRG STMTVGIIVP RLTDTVMAML YESLAKACSR SGRFAIVATT DDKPRADRLA
AESLLNRGVD GLILSTARLD DDFADDLIAR GIPHVFALRT AGASLCSVGD DRLGGYLATR
HLIDLGHRHI GVIAGPSYAS SAVGRVEGYR QAMQEAGIPV FPEAIVPSTF GIDAGAEAAE
YLMRLDNRPT AIFAVNDNTA IGALSGLSRL GVSVPKEVSV VGYNDIPIVN HLPTPLTTVR
VPFDQIASHA LDLLLSETVS AEDRIRISAP TLIPRKSTAK PAL
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