| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0063 |
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| Symbol | actR |
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| ID | 7389055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 55510 |
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| End bp | 56085 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643649799 |
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| Product | two component response regulator |
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| Protein accession | YP_002548023 |
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| Protein GI | 222147066 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG4567] Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCCAGG ATATGCCGAT CACCCACGAA GAGGGCGCTG CCGATCTCGG CCCGGACGCC
ACCTTGTTGA TAGTCGATGA CGACCAGCCC TTTCTGCGAC GGCTGGCCCG CGCCATGGAA
ACCCGTGGCT TTCAAGTGGA TATCGCCTCC TCCGTGGCGG AAGGCATTGC CAAGGCCAAG
ACCGCAGCCC CGAAATATGC CGTGGTTGAC CTGCGGCTTG GTGATGGCAA TGGTCTTGAT
GTGATCCAGG CCATTCGCGA AAGCCGGACC GACACCCGGA TCATCGTGCT GACCGGCTAC
GGCAATATTG CCACCGCCGT CACGGCCGTC AAACTCGGCG CGGTGGATTA TCTGTCAAAA
CCTGCCGATG CCGACGATGT CTTCAACGCC CTGACCCAGC GTCCGGGCGA AAAAGCCGAT
GTGCCGGAAA ATCCAATGTC TGCCGACCGG GTGCGCTGGG AACATATCCA GCGGGTCTAC
GAGGCCTGCG AACGCAATGT CTCGGAAACC GCAAGGCGGC TGAACATGCA CCGCCGCACC
CTGCAACGCA TTCTCGCCAA GCGCGCACCA AAGTAA
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| Protein sequence | MTQDMPITHE EGAADLGPDA TLLIVDDDQP FLRRLARAME TRGFQVDIAS SVAEGIAKAK
TAAPKYAVVD LRLGDGNGLD VIQAIRESRT DTRIIVLTGY GNIATAVTAV KLGAVDYLSK
PADADDVFNA LTQRPGEKAD VPENPMSADR VRWEHIQRVY EACERNVSET ARRLNMHRRT
LQRILAKRAP K
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