Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0062 |
Symbol | |
ID | 7389054 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 54930 |
End bp | 55490 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643649798 |
Product | hypothetical protein |
Protein accession | YP_002548022 |
Protein GI | 222147065 |
COG category | [S] Function unknown |
COG ID | [COG5321] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGTCTC TGGCCTCGCA AATTGCTGAA GACTGGCTTT TTTGCAACAG ACTTGGGGCC GGCAAAGAGA AGATTATGAC GATTCTTACT ATTTCCGTTA AGAATACATT AATCGACGGA AGGCAGTCCG AACGTGCCTT AATGATTCGC CGTGGCACGC AATTGCTTCT CGATCAGATG CGCCATGCCG TGCTGCCGGA GCTTTCGCTG GCCAGCGGCC GCCGCGCCGA CCTGATCAGC GTTTCGGACA AGGGTGAAAT CTGGATTACC GAAATCAAAT CCTCCATCGA GGATTTTCGG GTTGACCGCA AATGGCCGGA CTATCGCCAG CATTGCGACC GGCTGTTTTT TGCCACGCTG CCCGATGTGC CGCAGGAGAT TTTTCCGCAA GAGTGCGGCC TGATCGTCTC AGACGGCTAT GGCGCACATC TGTTGCGCGA TGCACCGGAA CACAGGCTTG CCCCCGCCAC CCGCAAATCC GTGATGCTGG CCTTTTCACG TGCGGCAGCC CAACGGTTGA TGCGGGCCGA ATGGGATGCG GCCCCGCAAT TTCTGCCCTG A
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Protein sequence | MPSLASQIAE DWLFCNRLGA GKEKIMTILT ISVKNTLIDG RQSERALMIR RGTQLLLDQM RHAVLPELSL ASGRRADLIS VSDKGEIWIT EIKSSIEDFR VDRKWPDYRQ HCDRLFFATL PDVPQEIFPQ ECGLIVSDGY GAHLLRDAPE HRLAPATRKS VMLAFSRAAA QRLMRAEWDA APQFLP
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