Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0018 |
Symbol | |
ID | 7389020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 13722 |
End bp | 14486 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643649764 |
Product | hypothetical protein |
Protein accession | YP_002547988 |
Protein GI | 222147031 |
COG category | [R] General function prediction only |
COG ID | [COG1451] Predicted metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTCCCT TGTTTTTGCG AAGCCCGACC AAAGTGGCAA AAAAGCCGAA AGTGCCAGAG AGCCGTGAGC TGTTGGTGGC TGGCCGACCT GTGCCGCTTG CCATTCGCGA AAACCTGCGC GCCACCCGCA TTACCCTGCG GATCGAGCCC GGTGGCCGGG GCCTGAAAAT GACCATTCCC AAAGGGGTGC GCCAAGGCGA CGTCAACGAT TTTATCGAAC GGCATCGCGG CTGGCTGGAA AGCAAGCTGG CTCGCTTTTC CGATGATACG AAAGTCAGGG CAGGGGGCGT GATTTCGCTG CGCGGTGTTG CGCATCGTAT CGAGCATACC GGCCAGCTGC GCGGCGTGAC CCAAGTGCAG ATGGAAAATG GCGAGCCGGT GATCCGCATC AGCGGCCTGC CGGAACACGC CGGTCGTCGG TTGTCGGCTT TTCTGAAAAA GGAAGCGCGG CTTGATCTTG AGCGGCTGGT CGCCATCCAT ACCGGGCGAC TTGGAAAACC GTCAAAGAGC CTGGCGCTGA AGGACACGCG CAGCCGTTGG GGCTCTTGCT CCTGGGATGG CAATTTAAGT TTTTCCTGGC GGATCGTCAT GGCGCCACCC TCGGTGATCG ATTACCTTGC CGCTCATGAG GTGGCGCATT TGAAGGAAAT GAACCACGGC CCGCAATTCT GGGCGCTGTG CAAACGTCTC TGCCCCGGCA TGGACGAGGC CAAGAGCTGG TTGAAGCGGC ATGGATCGGA ACTGCATGCC CTCGATTTTG ACTGA
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Protein sequence | MFPLFLRSPT KVAKKPKVPE SRELLVAGRP VPLAIRENLR ATRITLRIEP GGRGLKMTIP KGVRQGDVND FIERHRGWLE SKLARFSDDT KVRAGGVISL RGVAHRIEHT GQLRGVTQVQ MENGEPVIRI SGLPEHAGRR LSAFLKKEAR LDLERLVAIH TGRLGKPSKS LALKDTRSRW GSCSWDGNLS FSWRIVMAPP SVIDYLAAHE VAHLKEMNHG PQFWALCKRL CPGMDEAKSW LKRHGSELHA LDFD
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