Gene Avi_0017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0017 
Symbol 
ID7389019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp13165 
End bp13611 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content56% 
IMG OID643649763 
Producthypothetical protein 
Protein accessionYP_002547987 
Protein GI222147030 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCAAT CAGCATTGCT GCGTCCGGGC TGGAGGCCTG CGACGATTGC CATGATGGTG 
CTCGGCTTCG TGATCTTCTG GCCGCTTGGC CTTGCCATGC TTGCCTATAT TTTATGGGGC
GATCGCTTCC GCACATCGAA ACGCAACGCA AATGAGGCTA TGGACGCCAT GTTTTCAAAA
TGCTGCGGCA GCCGCCGGTC ACGTAATCGC AACCGCTTTA GCGCCTCTAG TGGCAATCTC
GCCTTCGACG AATGGCGTGT CACCGAGCTG GAGCGTATCG AGCAGGAACG TCGCAAGCTT
GAAGAAATGC GTGAAGAATT CGAGGCCTAT GTCCTGGAAT TGCAGCGCGC CAAGGATCAG
GATGAATTCA ACCGCTTCAT GAACCAGCGC AATGCCAGCC GCCGCGATGA CCGCGGCAGC
GATGTCCAGA CTTTCACTCC GGACTGA
 
Protein sequence
MNQSALLRPG WRPATIAMMV LGFVIFWPLG LAMLAYILWG DRFRTSKRNA NEAMDAMFSK 
CCGSRRSRNR NRFSASSGNL AFDEWRVTEL ERIEQERRKL EEMREEFEAY VLELQRAKDQ
DEFNRFMNQR NASRRDDRGS DVQTFTPD