Gene Avi_0010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0010 
SymbolmltA 
ID7389013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp5878 
End bp7023 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content58% 
IMG OID643649757 
Productmembrane-bound lytic murein transglycosylase 
Protein accessionYP_002547981 
Protein GI222147024 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2821] Membrane-bound lytic murein transglycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGGTG AAGCGACGAA GTTTCGGCTG GAGCCTGTTG GTTTCGACCA ACTCCCCGGT 
TGGGACGCGG ATGATCCCTC GGCGCTTTTG CCGGCCATGG CCGATTGCCT GGATTATCTC
ACCACGGTCA AGCCTTACCG GCCCGGCCAG TTGGGCTTGA CCGCACAGGA CCTTGTGCCG
CTGCTTGAAA AGGCAGCGGC ATTGCCACGA GCAGATGGCG ACGCATTGCG CCACCTGCTG
GAAGTCGAAT GCCAGGTTTT TCGTATAGCA CGCACGGATG GGAAGGCGGG TTTCGTTACG
GCTTTTTACG AGCCCGACAT CGAGGTTTCC GATCATCCTG ACGATCTCTA CCGCTTTCCT
TTTTACCGCC GACCTGACGA TTTGATCGAT CTTGACGATC AAAACCGGCC TGAAAACATC
GATCCGTCCT ATGTGTTTGG ACGCAAAAGC GAGGGCGGCG CGACTTATTA TCCGGATCGT
CAGGCCATCG ACCAGGGCTT TCTAGAGGGA CGCGGGCTGG AAATTGCCTG GGCGAAATCG
AAAGTCGATG TGTTTTTCGT CCATGTCCAG GGTGCCGCAC GGCTGCGTTA TGCCGATGGG
CGAGTTGGGC GGATTACCTA TGCGGCCAAG GCGGGCCATC CTTTTTCCGG CATCGGGGGG
CTTTTGCTGA AGCGGGGTGA AATTCCTCCC GAGGCGATGT CGATGCAGGC GATCCGCGCT
TGGCTCGCGT CTCATCCCGA TCAGGTCGAT GAGGTCTTAT GGCACAATCG GTCCTATATC
TTTTTCCGTG AAGCTGAGCT CGGTGACCTG TCACGCGGTC CGATCGCCGC GGCGAAAGTA
CCGTTGGTGG CGGGTCGATC CCTGGCGGTG GACCGGACGA TCCATACATT CGGCTTTCCG
TTTTTCATTC ATTCACAAAG CCTGACGTCA CAAGATCCAA CGGGAGTGAA TAGCGGCAAG
GCGTTTGCGC GATTGATGCT GGCGCTCGAT ACGGGGTCGG CGATTGTTGG ACCGGCGCGC
GGTGACATCT TTACCGGCTC TGGCGATGAA GCAGGAAATC TCGCTGGGGC GGTGCGCAAT
GACGCGGATT TCTATATCCT GATCCCGAAA CAGGCCGCTA AAAGGGTCGA GTCGAGGTTT
GGTTGA
 
Protein sequence
MSGEATKFRL EPVGFDQLPG WDADDPSALL PAMADCLDYL TTVKPYRPGQ LGLTAQDLVP 
LLEKAAALPR ADGDALRHLL EVECQVFRIA RTDGKAGFVT AFYEPDIEVS DHPDDLYRFP
FYRRPDDLID LDDQNRPENI DPSYVFGRKS EGGATYYPDR QAIDQGFLEG RGLEIAWAKS
KVDVFFVHVQ GAARLRYADG RVGRITYAAK AGHPFSGIGG LLLKRGEIPP EAMSMQAIRA
WLASHPDQVD EVLWHNRSYI FFREAELGDL SRGPIAAAKV PLVAGRSLAV DRTIHTFGFP
FFIHSQSLTS QDPTGVNSGK AFARLMLALD TGSAIVGPAR GDIFTGSGDE AGNLAGAVRN
DADFYILIPK QAAKRVESRF G