| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0006 |
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| Symbol | dnaQ |
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| ID | 7389009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 3187 |
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| End bp | 3897 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643649753 |
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| Product | DNA polymerase III subunit epsilon |
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| Protein accession | YP_002547977 |
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| Protein GI | 222147020 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGGAAA TCGTTTTCGA TACGGAAACC ACCGGACTGG AAAGCAAGCT GGACCGGGTG
ATTGAAATCG GTGGCATCGA ATTGTTCAAT CATTTCCCGA CCGGTCGCAG TTTTCACGTC
TATATCAATC CTGCCGACCG GGCCATTCAC CCGGATGCCT TGGCGGTTCA CGGCATTACA
CCTGAGTTTT TGAAGGACAA GCCGGTCTTC GCCGATATCG TCGAGGATCT GGTCGCTTTT
TTCGATGGCG CAAAATGGGT GGCGCATAAT GCCACATTCG ACATGGGATT TATCAATGCC
GAGTTTGAGC GGTTGGGTCG TCCGCTGGTC GGGCCGGAGC ATGTCATCGA TACCCTGTCT
CTGGCGCGGC GCAAACACCC GATGGGTCCA AACTCGCTCG ATGCACTTTG CCGACGCTAT
GGTATCGACA ATTCTCATCG CACCAAGCAT GGCGCCTTGC TCGATTCCGA ACTTCTGGCT
GAAGTCTATA TCGAAATGCT GGGCGGCCGC CAGGCGACCT TCGGTCTTGA GCAGTCTGGA
AACAGCGACA AGCGATCCCG CACTCAGGAT AGCAATGTGA CGGTGGAGAT TGCCGCCCGT
CCGAAAACAC TGGCGTCGCG TCTAACCGAG GCCGAACAGG AGCGCCATGC AGCCCTGGTC
AAGCGGCTCG GCCAGAAAGC GATCTGGGCG CATTACAATC AAGGCGAATA A
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| Protein sequence | MREIVFDTET TGLESKLDRV IEIGGIELFN HFPTGRSFHV YINPADRAIH PDALAVHGIT
PEFLKDKPVF ADIVEDLVAF FDGAKWVAHN ATFDMGFINA EFERLGRPLV GPEHVIDTLS
LARRKHPMGP NSLDALCRRY GIDNSHRTKH GALLDSELLA EVYIEMLGGR QATFGLEQSG
NSDKRSRTQD SNVTVEIAAR PKTLASRLTE AEQERHAALV KRLGQKAIWA HYNQGE
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