Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0001 |
Symbol | |
ID | 7387188 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 203 |
End bp | 1024 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643649749 |
Product | hypothetical protein |
Protein accession | YP_002547973 |
Protein GI | 222147016 |
COG category | [S] Function unknown |
COG ID | [COG1806] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAGAACA GAAAAAACTT CTTTCATCTG CACCTCATTT CTGACTCAAC GGGAGAAACA CTGATCTCGG CTGGACGGGC AGCAGCGGTT CAGTTTCCGC ATTCCAATCC GATCGAGCAT GTCTATCCGC TGGTGCGCAA CCGCCGGCAG GCGGATGCCG TGCTCCAATC AATCGATAAG GAACCCGGCA TCGTGCTTTA CACCATTGTC GATCCGGAGC TGGCGGACTT TATTGATCGG CGTTGTATCG AGATCGGTGT ACCCAGCGTT AACGTGCTTG AGCCTGTTAT CGGGACGTTT CAGGCCTATC TTGGTCCACT GGCGCGTCGG CGCGTCGGCG CCCAGCATGT GATGAATGCC GATTATTTTG CGCGTATCGA GGCGCTGAAT TACACGATGG ATCACGATGA TGGCCAGATG GCCGAGGATT ACGATCAGGC CGACGTCGTT CTGGTAGGGA TCAGTCGTAC GTCGAAAACC CCGACCAGCA TCTATCTTGC CAATCGTGGC ATTAAGACCG CCAATATTCC CATCGTGCCA GATTCGCCCT TACCGGAATC GCTGTTCGCT GCAAAAGGGC CATTGATCGT TGGATTGATC GCCACGTCTG ATCGAATTTC ACAAGTTCGC GGCCATCGTG AATTGGGGAC TGTCAGTGGT TTCGATCCAA GCGATTATAC GGACAGGGCG AGCATTGCGG AAGAATTGAA ATATGCCCGT TCGCTGTGTG CCCGTCACAA TTGGCCGGTC ATTGATGTGA CGCGGCGATC AATTGAAGAG ACAGCGGCGG CAATCATTGC GCTGCGTGCC AAGCCGCGCT AA
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Protein sequence | MENRKNFFHL HLISDSTGET LISAGRAAAV QFPHSNPIEH VYPLVRNRRQ ADAVLQSIDK EPGIVLYTIV DPELADFIDR RCIEIGVPSV NVLEPVIGTF QAYLGPLARR RVGAQHVMNA DYFARIEALN YTMDHDDGQM AEDYDQADVV LVGISRTSKT PTSIYLANRG IKTANIPIVP DSPLPESLFA AKGPLIVGLI ATSDRISQVR GHRELGTVSG FDPSDYTDRA SIAEELKYAR SLCARHNWPV IDVTRRSIEE TAAAIIALRA KPR
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