| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_6285 |
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| Symbol | attG |
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| ID | 7381148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 1277401 |
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| End bp | 1279809 |
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| Gene Length | 2409 bp |
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| Protein Length | 802 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643649745 |
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| Product | ABC transporter membrane spanning protein |
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| Protein accession | YP_002547969 |
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| Protein GI | 222107178 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCGCA CCGCTTTTCT GGCTTTGCTG TCGCATTGGC GGCGCAAGCC GCTTCAATTG
GCCATGCTGC TTCTCGGTTT GTCGCTGGCA ACAGCACTTT GGTCGGGGGT GCAGGCGATC
AATGCCGAGG CGCGGGCTTC TTATGCGCGG GCCGCTGCCA TGCTGGGGCA AAATCGCCTG
TCTGATATCC AAAGGAAAGA TGGCAGGCCC ATCCCCATCT CGACCTATGT CGCGCTGCGG
CGGGCGGGGC TGCTGGTTTC CCCGGTTCTT GAAGGGGAGA TGCGACTTGG CACGTTTCGC
CTGCGGTTGA TCGGCATAGA TCCCCTAACG ATCCCGTCGG TCGCCCAGCC AGTCGATCTG
CGCGGTGATG GCAATATCAA TCGTTTCCTG CTGCCCCCAG GGCAGATTGC GGTTTCGCAA
GCGACCGCGG ATGCCCTTCA GGGGCAATCG CTGCCGCCAC TTGATATCGT CAAGGATCTG
CCTTTTGCAA CTGGGTTTAC CGATATCGGC AGGGCGCAAG CCTTGCTGGC ACAACGCGAT
GGCTTGACCC GGCTGATCGT CTCGCCGGAA CAGCCGATTT CGCAACAGCA ACTGGCGGCA
TTGGCGCCTG AGCTGCGCTT GAAATCCCCT GATGGCGAAG GGGATCTTGC ACGATTAACG
GACAGTTTTC ATCTCAACCT GACGGCCTTC GGACTGCTGT CTTTCGTGGT CGGACTGTTC
ATCGTCTATG CGGCGGTGCG GCTGGCTTTC GAACAGAGGC GGCCCACCTT TCGCACGCTT
CGATCTCTTG GTCTCTCGGC CAGCGCCTTG ATGCTCCTGC TTTTCATGGA ACTGCTGGTC
TTTGCATTGG CTGCGGGCGT CGCGGGCGTG GCGCTTGGCT ATGTCGTAGC CTCTGTCTTG
CTGCCGGATG TGGCACTGAC ACTCAGGGGC CTTTATGGCG CCGATGTTCC TGGTACGCTG
GCTTTTCGGC CCCAATGGTG GGTGACAGGC ATCGGTATTG CGGTTGTTGG CACGCTGGCG
TCCGCCGGGC AAAGTCTCTG GCAGGTCTGG CGCATGCCTC TGCTGGCCCC GGCCCAGCCG
CGCGCCTGGG CTATGGCTTC GGAACGAGCC TGGTTTCTCC AGGCACTGGC TTCCGCCGTA
CTATTTGCGG TAACGCTGAT CTTGATGAAA TTTGGTCATG GTCTGGTGGC TGGTTTTGCC
ACTTTGGGAG CGCTCTTGCT GGCCTCGGCC CTGGCCTTGC CGGTCATTCT GGTGCCCGTG
CTGCGGTTGA TGCAGTCCTT GGCAAAGCGA CCGGTGTGGC AATGGTTCTG GGCCGATACC
CGCCAGCAAT TGCCCAGCCT TTCCCTGGCC TTGATGGCGC TTCTTCTGGC GTTATCGGCC
AATGTCGGGG TTGGAACCAT GGTGTCCAGC TTTCGTCTGA CTTTTGTCGG CTGGCTCGAT
CAAAGACTGG CCGCTGAGCT TTACGTGACG GCGCGCAACG ATAACGAGGC CGAGCGTTTG
CAGGCCTGGC TTGCCCCTCG GGTGAAGGCT GTGCTGCCAA TCTGGAATGC GCAGGGAGAA
GTCGGCGGCA AAACCGTGGT TATTCATGGC GTGGTCGATG ATGCGACCTA CCGCGATCAC
TGGCCGATGC TTGCCGCCAC GCCGGATGTC TGGGACAGGT TGGCCCGAGG TGAAGGGGCG
TTGATCAATG AACAGATGAT GCGCCGCGAG GGCTTGGCGG TGGGTGAGGA GATCACGCTG
CCCGGTGGCT GGAAGCCCCG TATTCTCGGT GTCTATTCCG ATTACGGTAA TCCCAATGAG
GATGTGATCG TCACTCAATC GGAATTGGTC AGCCGTTTTT CCGATCTCTC GCGCTTGCGG
TTCGGGCTGC GGATACGGCC AGAACAGACC GGCGCGCTGC GTGAGACTTT AATGACTGAA
TTCGGCTTGC CGCCCGACAA CGTCGTGGAT CAAGCGGTGA TCAAGGCGCG ATCACTGGCG
ATTTTCGAAA AGACCTTCGC CGTTACAGCC GCTCTCAATG TGTTGACGCT GGGGGTCGCG
GGGCTTGCGA TGTTTGCCAG CCTCATGACG CTGTCAGGCA TGAGGCTGCC CCAGATCGCT
CCGGTCTGGG CAATGGGTCT GACCCGTCGC GCGATAACCG GGTTGGAGCT TGCCCGTACT
CTTATCCTTG CAGGCTTTAC ACTCGTTGCC GCGCTGCCGG TGGGACTTGG ACTGGCCTGG
GTTTTGTTGG CGATAGTCAA TGTCGAGGCC TTTGGTTGGC GCTTACCAAT GCATGTGTTT
CCAGTCCAGT GGCTATGGTT GGGAGGGTTT GCACTGTTGG CCTCGCTGCT CTCGGCACTG
ATCCCACTTG CCGGTATTGC CCGATTGAAG CCATCGGATT TATTGAAAGT CTTTGCCAAT
GAACGCTAA
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| Protein sequence | MLRTAFLALL SHWRRKPLQL AMLLLGLSLA TALWSGVQAI NAEARASYAR AAAMLGQNRL
SDIQRKDGRP IPISTYVALR RAGLLVSPVL EGEMRLGTFR LRLIGIDPLT IPSVAQPVDL
RGDGNINRFL LPPGQIAVSQ ATADALQGQS LPPLDIVKDL PFATGFTDIG RAQALLAQRD
GLTRLIVSPE QPISQQQLAA LAPELRLKSP DGEGDLARLT DSFHLNLTAF GLLSFVVGLF
IVYAAVRLAF EQRRPTFRTL RSLGLSASAL MLLLFMELLV FALAAGVAGV ALGYVVASVL
LPDVALTLRG LYGADVPGTL AFRPQWWVTG IGIAVVGTLA SAGQSLWQVW RMPLLAPAQP
RAWAMASERA WFLQALASAV LFAVTLILMK FGHGLVAGFA TLGALLLASA LALPVILVPV
LRLMQSLAKR PVWQWFWADT RQQLPSLSLA LMALLLALSA NVGVGTMVSS FRLTFVGWLD
QRLAAELYVT ARNDNEAERL QAWLAPRVKA VLPIWNAQGE VGGKTVVIHG VVDDATYRDH
WPMLAATPDV WDRLARGEGA LINEQMMRRE GLAVGEEITL PGGWKPRILG VYSDYGNPNE
DVIVTQSELV SRFSDLSRLR FGLRIRPEQT GALRETLMTE FGLPPDNVVD QAVIKARSLA
IFEKTFAVTA ALNVLTLGVA GLAMFASLMT LSGMRLPQIA PVWAMGLTRR AITGLELART
LILAGFTLVA ALPVGLGLAW VLLAIVNVEA FGWRLPMHVF PVQWLWLGGF ALLASLLSAL
IPLAGIARLK PSDLLKVFAN ER
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