| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_6270 |
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| Symbol | rhaU |
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| ID | 7381310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 1263826 |
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| End bp | 1264149 |
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| Gene Length | 324 bp |
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| Protein Length | 107 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643649732 |
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| Product | L-rhamnose 1-epimerase |
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| Protein accession | YP_002547956 |
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| Protein GI | 222107165 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3254] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02625] L-rhamnose 1-epimerase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.203804 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAGAGA CTGAAAAATA TGCCTTCAAG ATGCAGCTCC ATCCAGGCAT GGAGGCCGAA
TATAAAAAGA GGCATGATGC GATCTGGCCG GAACTGGTGG CGTTGTTGCA TGAGGCTGGC
GTCAGTGATT ATTCCATCCA CCTCGACCGG GAAACAAACA CGCTCTTCGG CCTGCTGACC
CGGCCCAAAG GCCACGGCAT GGCCGCGCTG CCAGGGCACC CGATCATGCA GCGCTGGTGG
GCGCATATGG GTGATATCAT GGCCACCAAC CCGGATGGAT CGCCGGTCGC TGTCGAGCTC
GTGCCGATGT TTTACATGCC ATGA
|
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| Protein sequence | MAETEKYAFK MQLHPGMEAE YKKRHDAIWP ELVALLHEAG VSDYSIHLDR ETNTLFGLLT
RPKGHGMAAL PGHPIMQRWW AHMGDIMATN PDGSPVAVEL VPMFYMP
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