| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_6268 |
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| Symbol | |
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| ID | 7381308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 1261812 |
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| End bp | 1262813 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643649730 |
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| Product | ABC transporter membrane spanning protein |
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| Protein accession | YP_002547954 |
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| Protein GI | 222107163 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGCC TGCTGAAACA CCGCGAGATA GCATTGGGTG CCATTATCCT CCTGCTGATC
GCCGGGTTCG CCACCCGGGC AGGCGGTTTT GCCTCGCCCG GCAATCTGGC GACGATCTTC
AACGATACGT CGATCCTGAT CATTCTGGCG CTGGCGCAGA TGACTGTGAT CCTCACCAAA
TCAATCGATC TGTCGGTTGC GGCCAATCTC GCCTTGTCCG GCATGGCGGT GGCGATGATG
GATTCGAATT TTCCGGGCCT GCCGCTGGTG CTGCTGATTG CGGCGGCTGT GCTGATCGGG
GCGGCACTCG GCGCGATTAA TGGCTATCTC GTCTGGTTGT TGCAGATCCC GCCCATCGTC
GTGACGTTGG GTACGCTGAC GATCTATCGC GGCATGGCTT TCGTGCTGTC GGGTGGAGCC
TGGGTCAACG CTCATCAGAT GACGCCAGAT TTCCTCAATC TGCCGCGCAT TGTCATCATG
GGGCTTCCGG TTCTGGCATG GATTGCAGTG ATCGTGGTCA TTGCCATGGC TGTTGTGCTG
GGGCGTACCA CCTTTGGCCG CGCCACCTAT GCCGCTGGTG GGAATGCGAC AGCTGCGGTT
TATGCTGGCA TCGACATCGG TTGGACACGA TTTCTGGCCT TCGTGCTGTC AGGCGGCCTA
GCTGGCCTCT GCGGCTATCT CTGGGTGTCG CGCTACGCGG TTGCCTATGT GGATATTGCC
AGCGGTTTTG AGTTGGACAG CGTGGCAGCT TGCGTTATCG GCGGCATTTC GATCGCCGGT
GGCATTGGCT CGGTCGCTGG CACCGTGCTG GGGGCTTTAT TCCTGGGTGT TATCAAGAAT
GCATTGCCTG TCATCGGCAT TTCGCCCTTC GCCCAGATGG CAATATCCGG TGTGGTGATT
GTTTTGGCCG TGGTGTTCAA CGCCCGGGCC GAACGCAGAA AGGGCCGGAT CATCCTGCGT
GACCGGGCCG CGGGCAGCAC GATTCAGGAG ATTACGGCAT GA
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| Protein sequence | MKSLLKHREI ALGAIILLLI AGFATRAGGF ASPGNLATIF NDTSILIILA LAQMTVILTK
SIDLSVAANL ALSGMAVAMM DSNFPGLPLV LLIAAAVLIG AALGAINGYL VWLLQIPPIV
VTLGTLTIYR GMAFVLSGGA WVNAHQMTPD FLNLPRIVIM GLPVLAWIAV IVVIAMAVVL
GRTTFGRATY AAGGNATAAV YAGIDIGWTR FLAFVLSGGL AGLCGYLWVS RYAVAYVDIA
SGFELDSVAA CVIGGISIAG GIGSVAGTVL GALFLGVIKN ALPVIGISPF AQMAISGVVI
VLAVVFNARA ERRKGRIILR DRAAGSTIQE ITA
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