| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_6259 |
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| Symbol | |
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| ID | 7381300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 1252388 |
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| End bp | 1253050 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643649722 |
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| Product | two component response regulator |
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| Protein accession | YP_002547946 |
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| Protein GI | 222107155 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.1188 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGGGTAT TACTTGTAGA GGATGACGCT GTTCTGGGTC AGGCCATTCG CGATCATGTC
GGGGCAGCCG GTCATGCTGT GGACTGGATG AAGGGGCTAC AGGACGCCGA GGCCTGCACC
AGAACCGTTG CCTATGGCCT GATCCTGCTT GACCTGCGTT TGCCTGACGG CAACGGCATC
GACTTTCTGA AACGGTTGCG CGAGCATGGC GACGTAACCC CAATCATCAT CCTCACAGCT
CATGACCAGA TCTCGGATCG GATCGAGGGC CTCAACTCTG GCGCTGACGA TTATCTGGTC
AAGCCATTCA ATCTCGATGA GTTGACGGCG CGTATATCGG CCGTCGCGCG CCGCTATGCT
GCAAAGCCAA ATCCGATTAT TCGGATTGGC ACGTTGGAAA TCAATCCCGC AGAGCGGCGT
ATTGCCGATG GTGCCGATTC CATTAGCCTC TCCAGCCGGG AATGGGCGGT ACTTGATGCG
CTTTTGGCAA GGCCCGGCGC TGTGGTCTCC AAATCCCGCA TCGAGGAAGC CCTCTATGCA
TTCGGATCGG AAATCGAAAG CAATACGGTG GAAGTCTATG TCAGTCGGCT GCGCAAGAAA
ATTGGCAAGG ATCGCTTGCT AACGGTCCGC GGCGTTGGCT ACAGCATTGC GGGGGCGGCA
TGA
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| Protein sequence | MRVLLVEDDA VLGQAIRDHV GAAGHAVDWM KGLQDAEACT RTVAYGLILL DLRLPDGNGI
DFLKRLREHG DVTPIIILTA HDQISDRIEG LNSGADDYLV KPFNLDELTA RISAVARRYA
AKPNPIIRIG TLEINPAERR IADGADSISL SSREWAVLDA LLARPGAVVS KSRIEEALYA
FGSEIESNTV EVYVSRLRKK IGKDRLLTVR GVGYSIAGAA
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