| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_6234 |
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| Symbol | nagA |
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| ID | 7381278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 1227430 |
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| End bp | 1228632 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643649700 |
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| Product | N-acetylglucosamine-6-phosphate deacetylase |
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| Protein accession | YP_002547924 |
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| Protein GI | 222107133 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1820] N-acetylglucosamine-6-phosphate deacetylase |
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| TIGRFAM ID | [TIGR00221] N-acetylglucosamine-6-phosphate deacetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTCGT CTCTTGCGGC TCCCTCCTCA TTCGCTGTGA CAGGCGGCCG GATCTTTGAC
GGCACGCGTT TCCATGACGA TCAGGCCCTG ATTGTCGATC AGGGGCGAAT CGCTGATATC
GTCTCCAACA ATGCCGTGCC TGCTAGCCTT GCCAGGATCG AGGCAGGGTC GGCTCTGGTC
GTGCCTGGCT TTATCGATCT GCAAGTCAAT GGCGGCGGCG GTGTGTTGCT GAACAACCAG
CCGGATCTTG ATGGTATCCG GACGATTTGC GCCGCCCATG CAAGGTTCGG CACCACTGCG
CTATTACCGA CATTGATTAC TGACCATCCT GCCCTACGCG ATCAGGTTCT GAGCCTTGGC
CGCCAAGCGC TGACCGAGCA AATTCCCGGC TATCTGGGGC TTCACCTCGA AGGTCCGCAC
CTTTCGCTGG CGCGCAAGGG CACCCATGAT CCCGCCCTGA TCCGCCCCAT GAACGACGAT
GATCTGGCAA AGCTTATTGC CTCCGCTGGC ACATTTGGCA CTGCATTGAT CACCATTGCG
CCAGAAAGCG TTACCCCGCA GCAGGTGAAA ACCCTGCGAG CAGCGGGTTA TCACATCAGC
CTGGGCCACA CGGATGCGAG TTGCGCGCAG ATTGGCGGCT ATGTCGAGGC GGGCGCGACG
CTCGTCACTC ATTTGTTCAA TGCCATGAGC CAGATGGGCA ATCGCGAACC GGGCCTTGTC
GGAGCAGCCC TTGCTTCGGA AACGCTGTCC TGCGGGATTA TCGCTGACGG TTTCCATGTC
GATCCGGTCT CGATGGGCAT TGCCCTTCGC GCCAAACGCG GGTCTGGCCG GATTTTCCTG
GTCACCGACG CCATGTCGAG CATCGGCACT GATGAAACCG GCTTCATGCT GAATGGTCGC
CCGGTCTTCC GCCAGGGCGG ACGGTTGACT TTAGCCGATG GAACCCTTGC TGGTGCCGAT
ATCGATATGC TGTCCTGCAT TCGGTTTGTC CATGAAAAGC TCCAAGCATC GCTTGAGGAG
GCGTTGAACA TGGCGTCGCT TTATCCAGCT GAGGCGATTG GATGCGAGAC GAAAGGTCAG
CTTGCGCCTG GCAAGGACGC CGACTTCCTG TTGCTCACTC CGCAACTCGA TCTGGTTTCC
ACCTGGATCG CTGGCACATG CGTTCATAGC ACAGCAACAC ATTCCGAGGC CCGGCGCGCA
TGA
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| Protein sequence | MNSSLAAPSS FAVTGGRIFD GTRFHDDQAL IVDQGRIADI VSNNAVPASL ARIEAGSALV
VPGFIDLQVN GGGGVLLNNQ PDLDGIRTIC AAHARFGTTA LLPTLITDHP ALRDQVLSLG
RQALTEQIPG YLGLHLEGPH LSLARKGTHD PALIRPMNDD DLAKLIASAG TFGTALITIA
PESVTPQQVK TLRAAGYHIS LGHTDASCAQ IGGYVEAGAT LVTHLFNAMS QMGNREPGLV
GAALASETLS CGIIADGFHV DPVSMGIALR AKRGSGRIFL VTDAMSSIGT DETGFMLNGR
PVFRQGGRLT LADGTLAGAD IDMLSCIRFV HEKLQASLEE ALNMASLYPA EAIGCETKGQ
LAPGKDADFL LLTPQLDLVS TWIAGTCVHS TATHSEARRA
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