| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_6233 |
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| Symbol | |
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| ID | 7381277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 1226525 |
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| End bp | 1227433 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643649699 |
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| Product | transcriptional regulator ROK family |
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| Protein accession | YP_002547923 |
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| Protein GI | 222107132 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATCGTCT GTTTCGATAT TGGCGGAACC GCCATCAAGG GCGCAATTGC CTATTCGCCT
GAGGATATTC GTCCCTTTCC ACGCCAGCCA ACGCCGGGAC AGGATTTCGA TGCATTTGTC
GGCGTCATCA GGTCCATCAT TGCCGAGACG GGAGAGACAC CAAGCTGCGT GGCAATTTCC
ATCTGTGGCA TTATAGATGT GGATAGCCGC CGCGCTGTCG TCGCCAATAT ACCCTGCATC
CATGGCCGTT TACTGCAACA GGATCTGGAA GAGGCCCTGG GCCTGCCGGT ACTGATCGCC
AATGATGCCG ATTGTTTCGC AATTGCCGAG GCTGGGCTGG GCGCGGGGCG CGGCCACCGC
GTGGTGTTCG GTGTCATTCT CGGTACAGGC GTCGGCGGCG GTCTGGTGAT CGATGGTAAA
CTGATCAATA GCGATGGCGG CTTTGCCGGA GAATGGGGCC ATGGACCCAT TGCCGCCACC
GAGGTTGGCG AACCGCCCGT CACCATCCCT CGATTTCAAT GCGGTTGCGG TCAGAAAGGC
TGTATTGACG CCATCTGTAG CGCGCGCGGC ATGGAAAAGC TCCATGCGCA CCTGAACGAC
GAAAACCGAA CGAGTGAGGA CATCGTCAAA GATTGGGAAA CCGGCGAACC CAACGCAAGC
CAAACCATCG CGGCATTTGT CGAATTACTT TCCAGTCCGT TGGCTCTGGT CGTCAATACG
ACGGGGGCGA GCATACTGCC GGTCGGCGGC GGCCTGTCCA ATGCGACAAC CCTGGTTGAC
GCCATCGATT TAGCCGTCAG AACCAAGATC TTGCGACGGT TCAGCCATCC TATTGTGGTT
CCAGCGCAAT GCCGACTGGA GCCGGGCCTG ATCGGTGCAG CCTTGCTCGG GCTTGCAAGG
CCAAATTAA
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| Protein sequence | MIVCFDIGGT AIKGAIAYSP EDIRPFPRQP TPGQDFDAFV GVIRSIIAET GETPSCVAIS
ICGIIDVDSR RAVVANIPCI HGRLLQQDLE EALGLPVLIA NDADCFAIAE AGLGAGRGHR
VVFGVILGTG VGGGLVIDGK LINSDGGFAG EWGHGPIAAT EVGEPPVTIP RFQCGCGQKG
CIDAICSARG MEKLHAHLND ENRTSEDIVK DWETGEPNAS QTIAAFVELL SSPLALVVNT
TGASILPVGG GLSNATTLVD AIDLAVRTKI LRRFSHPIVV PAQCRLEPGL IGAALLGLAR
PN
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