| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_6215 |
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| Symbol | cyoB |
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| ID | 7381264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 1210979 |
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| End bp | 1212982 |
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| Gene Length | 2004 bp |
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| Protein Length | 667 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643649686 |
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| Product | cytochrome o ubiquinol oxidase subunit I |
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| Protein accession | YP_002547910 |
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| Protein GI | 222107119 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02843] cytochrome o ubiquinol oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.1112 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCTCAA ACCCTGACCT TATGAAGTTC ATCTTCGGCC GGTTGACCCT AGATGCGATC
CCGTATCACG AACCCATTCT CGTGCTGACC TTTCTGGCTG TCGCGATCGG TGGCATTGCC
GTGCTCGGCG CCGTTACCTA TTTCCGCCTC TGGGGCTATC TCTGGAATGA ATGGTTCACC
AGCGTCGACC ACAAGAAGAT CGGCGTGATG TATGTCATTC TGGCGCTGAT CATGCTGTTG
CGTGGCTTTG CCGATGCCTT GATGATGCGT GGCCAGCAGG CCATGGCCTT CAATGGCAAT
GAAGGCTTCC TGCCGCCGCA TCACTATGAC CAGGTCTTCA CCGCGCATGG CGTGATCATG
ATCTTCTTCA TGGCCATGCC GTTTGTAACC GGGTTGATGA ACCTCGTCGT TCCCTTGCAA
ATCGGCGCGC GCGACGTATC CTTCCCGTTC CTCAACAACT TCTCCTTCTG GATGACGGTT
GCTGGCGCGG TGATCGTAAT GATTTCGCTG TTCGTCGGTG AGTTCGCCCG TACCGGCTGG
CTTGCATATC CACCACTTTC GGGTGGCGAT TACAGCCCCG GCGTCGGCGT TGACTATTAC
ATTTGGGGAC TTCAGGTGGC CGGTGTCGGA ACGACATTAT CAGGCATCAA CCTGATCGCC
ACCATCGTTA AAATGCGCGC TCCGGGCATG ACGATGATGA AAATGCCAAT CTTCACCTGG
ACCTCGCTCT GCACCAACGT GCTGATCGTT GCGAGCTTCC CGATCCTGAC CGCGACTTTG
GCCCTGCTGA CGCTTGACCG TTATGTGGGC ACCAATTTCT TCACCAACGA TCTCGGCGGC
AACCCGATGA TGTATGTGAA CCTGATCTGG ATCTGGGGTC ACCCGGAAGT CTATATCCTG
GTTCTGCCCG CCTTCGGCAT TTTCTCGGAA GTGGTTTCGA CCTTCTCCGG CAAGCGCCTG
TTCGGCTACA CATCGATGGT TTATGCCACA GTCTGTATTA CGGTCCTGTC CTATCTGGTG
TGGCTGCATC ACTTCTTCAC CATGGGTTCA GGCGCCAGCG TTAATTCGTT CTTCGGCATC
ACCACAATGA TCATCTCGAT CCCGACGGGC GCGAAGATCT TCAACTGGCT GTTCACGATG
TATCGTGGCC GCATCCGGTT CGAAGTGCCG ATGCTGTGGA CCATGGGCTT CATGGTGACC
TTCGTCATCG GCGGCATGAC AGGCGTTCTT CTCGCCGTAC CCCCAGCCGA CTTCGTCCTG
CACAACTCGC TGTTCCTGAT CGCCCACTTC CATAACGTCA TCATCGGCGG CGTGGTATTC
GGACTGATGG CCGGTGTCAC CTTCTGGTTC CCGAAAGCGT TCGGCTACAA GCTCGATCCG
TTCTGGGGCA AGATGTCCTT CTGGTTCTGG CTGGTCGGCT TCTACTTCGC CTTCATGCCG
CTTTATGTAC TCGGCCTGAT GGGTGTCACC CGCCGCATGA GCCAGTTCGA CGATCCGTCG
CTGCAAATCT GGTTCATCAT CGCCGCATTT GGCGCCTGCC TGATTGCCCT TGGTATCGCT
TCCTTCGTCA TCCAGCTTGT GGTCAGCTAT TTCAAGCGTC ACGAACTGGC CGACCTGACA
GGCGACCCTT GGAATGGCCG GACTCTGGAA TGGTCTATTT CTTCGCCACC TCCAGCCTAT
AACTTCGCCT TCACGCCTGT TGTCCATGAC ACCGATGCCT GGGATGACAT GAAGAAGCGT
GGCTATAGCC GTCCTCTGCT GGGCTTCAAG CCGATCCACA TGCCGAAGAA TACCGGCACG
GGTGTTATCC TTGCGGGCCT CAGCGTTGCC ATGGCATTCG GCCTGATCTG GTACATGTGG
TGGTTGGCCA TCGTGTCTTT CGTGGCGATC GTCGCAGTGT CGATCTCCCA CACGTTCAAC
TACAACCGCG ACTTCTATAT CTCCGCCGAA GAGGTGGTGA ATACCGAGGC AACGCGGACC
GCGCTTCTGG CAAGGAAGGG GTGA
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| Protein sequence | MFSNPDLMKF IFGRLTLDAI PYHEPILVLT FLAVAIGGIA VLGAVTYFRL WGYLWNEWFT
SVDHKKIGVM YVILALIMLL RGFADALMMR GQQAMAFNGN EGFLPPHHYD QVFTAHGVIM
IFFMAMPFVT GLMNLVVPLQ IGARDVSFPF LNNFSFWMTV AGAVIVMISL FVGEFARTGW
LAYPPLSGGD YSPGVGVDYY IWGLQVAGVG TTLSGINLIA TIVKMRAPGM TMMKMPIFTW
TSLCTNVLIV ASFPILTATL ALLTLDRYVG TNFFTNDLGG NPMMYVNLIW IWGHPEVYIL
VLPAFGIFSE VVSTFSGKRL FGYTSMVYAT VCITVLSYLV WLHHFFTMGS GASVNSFFGI
TTMIISIPTG AKIFNWLFTM YRGRIRFEVP MLWTMGFMVT FVIGGMTGVL LAVPPADFVL
HNSLFLIAHF HNVIIGGVVF GLMAGVTFWF PKAFGYKLDP FWGKMSFWFW LVGFYFAFMP
LYVLGLMGVT RRMSQFDDPS LQIWFIIAAF GACLIALGIA SFVIQLVVSY FKRHELADLT
GDPWNGRTLE WSISSPPPAY NFAFTPVVHD TDAWDDMKKR GYSRPLLGFK PIHMPKNTGT
GVILAGLSVA MAFGLIWYMW WLAIVSFVAI VAVSISHTFN YNRDFYISAE EVVNTEATRT
ALLARKG
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