| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_6213 |
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| Symbol | cyoD |
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| ID | 7381262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 1209962 |
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| End bp | 1210360 |
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| Gene Length | 399 bp |
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| Protein Length | 132 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643649684 |
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| Product | cytochrome o ubiquinol oxidase subunit IV |
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| Protein accession | YP_002547908 |
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| Protein GI | 222107117 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3125] Heme/copper-type cytochrome/quinol oxidase, subunit 4 |
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| TIGRFAM ID | [TIGR02847] cytochrome o ubiquinol oxidase subunit IV |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.261979 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACGACA ATTCGCACGC ACATTCGCAT GGCCACGGCC ATGAGCATCA TCATGGCGGC
CACGAGGCCA GCCACGGCTC GATGAAGACC TATATGATCG GCTTTATTTT GTCGGTCACC
CTGACGTCGA TACCGTTCTA TCTGGTGATG AGCGGCAGCC TGACCAACAA GGCCTTGCTG
GCTGGCATCG TTATGGGCCT TGGTGCCATC CAGGTCGTGG TTCACATGAT CTACTTCCTG
CATATGAATA CCAAGTCGGA AGGCGGCTGG AACATGATGG CGTTGATCTT CACCATCATC
GTTGTCGTTA TCGCACTCTC CGGCTCTCTC TGGGTCATGC ATCACTTGAA CACCAATATG
ATGCCGATGA GCCCCGAAAT GATGCGTAAC GTTCCGTAA
|
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| Protein sequence | MNDNSHAHSH GHGHEHHHGG HEASHGSMKT YMIGFILSVT LTSIPFYLVM SGSLTNKALL
AGIVMGLGAI QVVVHMIYFL HMNTKSEGGW NMMALIFTII VVVIALSGSL WVMHHLNTNM
MPMSPEMMRN VP
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