| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_6184 |
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| Symbol | |
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| ID | 7381239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 1190017 |
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| End bp | 1191261 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643649661 |
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| Product | portal protein |
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| Protein accession | YP_002547885 |
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| Protein GI | 222107094 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4695] Phage-related protein |
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| TIGRFAM ID | [TIGR01537] phage portal protein, HK97 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGATGGC TTCGAGCGCT TGGCGGTGTT GTCTCCGGGC AACCGAAGGC AGCAACGCAA
AGCGATAGCG GTGGAAGGCA GTACAGCGCC AACGATCCGC GCTTGCTTGA GGCCATCAGG
TCGGCGGTCA ATGGTGCGCC AAGCGCGGAT CTGATGCGGA ATGGTGCAAT CAACCGGGCC
GTTCGCCTGC ATTGCGAAAG CATCGGCATG TTGCCGCTGC ATCTGATGTA TCAGGACAAG
GATAAGGGCA AGGCAAAAGA GCATCCGCTT TTTTCCATCC TGCACCGCAA GCCGAACAAT
TGGCAGACAG CCTATGAGTT CAAGCGCCTC ATGCAGTCGC AGCTTTTGCG GCGCGGCGTT
GCTTATGCCC AGATCGTCAG ATCGAGTGGC CGGATTATCC AGTTGCAACC GCTGGCGAAA
TTCCAGGTTG TTGCAAAACA GAATGCTGAC TGGTCCATCA CCTATGAGCT GACGAACAGG
AATGGCGCGA AGGTTACGCT GGCGCAAAAC GAAGTGCTTG CTATCCGCGA TCTCGATCTT
GAGGACGGCG TGGTTGGTGG ATCGAGAGTT GATCAGGCGC GGGATTCGGC GCTGATGACG
GCGACGATCA AGCAGGCCGT GAAGAAGCTG TTCGACAACA ATATGCAGCT TGGCGGGGCT
TTGAGTACGC CGAACAAACT CTCTCCTGAG GCTCGAGGTT TCCTGAAAGC GTCCATGGCG
GAAAGAACCG GCGCAGAAAA TGCCGGAAAG TGGCTGCTTC TTGAAGAGGA TTTGAAGGCC
ACCCAATTTG AAAACTCGCT TGGCGATAAT CAGCAGGTTG AAAACCTGCA TTTCCAGATT
GAAGAAATCG CCCGGATAAT GGGAACGCCA CGGCCCTTGT TGATGATGGA TGAGACGGCC
TGGGGTTCCG GCATTGAAGC GCTGGGGTTG TTCTTCATTC AATATTGCCT GAGTGCGCAA
TTCACGAATT GGGAACAGGC CATATCCCGC GACTGCCTGA CGGAAAAAGA GCAAGAGGAA
TATGTGCCGA AATTCAATGA GGGCGCATTG TTGCGCGGCT CGATGAAAGA TCAGGCAGAG
TTCTTCACCA AGGCGCTTGG CTCCGGCGGC GGGCGGGCCT GGATGACGCA AGACGAAATA
CGAGGCCTCC AGGATCTTCC CGCGCATGGC GGCGAAGCGG ATGTGCTTCC CCAGCCGACA
ACATCAAACA CTGGAGCTGC AAATGTCCCT GCGAACCCTG CCTGA
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| Protein sequence | MGWLRALGGV VSGQPKAATQ SDSGGRQYSA NDPRLLEAIR SAVNGAPSAD LMRNGAINRA
VRLHCESIGM LPLHLMYQDK DKGKAKEHPL FSILHRKPNN WQTAYEFKRL MQSQLLRRGV
AYAQIVRSSG RIIQLQPLAK FQVVAKQNAD WSITYELTNR NGAKVTLAQN EVLAIRDLDL
EDGVVGGSRV DQARDSALMT ATIKQAVKKL FDNNMQLGGA LSTPNKLSPE ARGFLKASMA
ERTGAENAGK WLLLEEDLKA TQFENSLGDN QQVENLHFQI EEIARIMGTP RPLLMMDETA
WGSGIEALGL FFIQYCLSAQ FTNWEQAISR DCLTEKEQEE YVPKFNEGAL LRGSMKDQAE
FFTKALGSGG GRAWMTQDEI RGLQDLPAHG GEADVLPQPT TSNTGAANVP ANPA
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