| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_6150 |
|---|
| Symbol | |
|---|
| ID | 7380794 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011988 |
|---|
| Strand | - |
|---|
| Start bp | 1170141 |
|---|
| End bp | 1170488 |
|---|
| Gene Length | 348 bp |
|---|
| Protein Length | 115 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643649638 |
|---|
| Product | bacteriophage protein |
|---|
| Protein accession | YP_002547862 |
|---|
| Protein GI | 222107071 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.801978 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGACG AGAACCGCCG CGAAGAGATC CGCGAACGGA TTATGTCTCG CGTGATTGAA
AAACAGGAAA CGGGTTGCTG GATCTGGACA GGTCCGACCT CCGGCAACGA AGGACGCGGC
GCGGGCTATC CGCGCATGTC GCTCAGTGGT CAGACGGTAG CTGTCCATCT TGTCATGTGG
ACCAATGAAT TCGGCTACAT CCCCGGAAAG AAGGAAATCG ATCACGTATG CCGCAACCGG
CTTTGCGTGC GGCCTCACCC CGATCATCTG GAGCTTGTCA CCAAGAAACG AAACGCCCTT
CGGCGCGAAC AGGCGAAGCG GGCATTCGCT TGTATGGAGG TGCAATAA
|
|---|
| Protein sequence | MPDENRREEI RERIMSRVIE KQETGCWIWT GPTSGNEGRG AGYPRMSLSG QTVAVHLVMW
TNEFGYIPGK KEIDHVCRNR LCVRPHPDHL ELVTKKRNAL RREQAKRAFA CMEVQ
|
|---|
| |