| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_6145 |
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| Symbol | |
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| ID | 7380790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 1165798 |
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| End bp | 1166487 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643649633 |
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| Product | two component response regulator |
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| Protein accession | YP_002547858 |
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| Protein GI | 222107067 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGCGTG TTCTTTTGAT TGATGACGAC CTGGAATTTA CCGGATTGCT TTGCGAATAT
CTGACGGATG AAGGGTTTGA TGTACTCTCG ACAGACGATG GCGCCAAGGG CCTTGCTTTT
GTCGACAGTG GTGCGACCGA TATCATCGTT CTCGACGTCA TGATGCCGAT CATGAATGGT
GTCGATGTCT TGCAGAACAT CCGAAAATCC AGTGAAATTC CTATCGTCAT GCTGACAGCC
AGGGGGGATG ACAAGGATCG GATTACCGGG CTAGACCTCG GTGCCGACGA CTATGTCTCC
AAGCCCTGTT CGCCAGGTGA ACTGGTCGCC CGGCTCCGGG CAATATTGCG TCGTACCGGT
AAAACACCGC CCGAACACCC ATCTCAACCG CTCAAAAGCG GCGAACTCGT TCTTTATCCA
ACAAGCAGGC AGGCGCATAT CAATGGTGAG GCTCTCGCCT TGACCGGGAC GGAATACAAT
CTCCTGGAGC TTCTGGTTCG CAATGGCGGC AAGGTCGTTT CCAAACATGA CATTTCCCAA
AGCGTATTCG GCAGGCCCCT GACGCCTTTC GACCGGCGTA TCGATGTTCA TCTCAGCAGT
ATCCGCCAGA AACTCGGCCT CAGAAAAGAC AGACAAAGCT GGATCCAGTC TGTTCGGGGG
CAGGGTTACA TTCTGCTACA GGATAGCTGA
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| Protein sequence | MTRVLLIDDD LEFTGLLCEY LTDEGFDVLS TDDGAKGLAF VDSGATDIIV LDVMMPIMNG
VDVLQNIRKS SEIPIVMLTA RGDDKDRITG LDLGADDYVS KPCSPGELVA RLRAILRRTG
KTPPEHPSQP LKSGELVLYP TSRQAHINGE ALALTGTEYN LLELLVRNGG KVVSKHDISQ
SVFGRPLTPF DRRIDVHLSS IRQKLGLRKD RQSWIQSVRG QGYILLQDS
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