Gene Avi_6139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_6139 
Symbol 
ID7380786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011988 
Strand
Start bp1160804 
End bp1161277 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content58% 
IMG OID643649629 
Producthypothetical protein 
Protein accessionYP_002547854 
Protein GI222107063 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TTGCCGCAAT TCTGCTGTCA GCCGCGACAC TGCTGACAGG TATGGCGCCG 
GTTGGCGCAT CCGCCGCACC AACATCGCTT TCGCAACCTG CACAGACGCA GAGTGTTCCC
GGTGCCACAG CACAGGGCGG CGTCCAGGTC GCGGAAAATA GTTGGGCTGA CGATCGTCGC
CAGCGTCGCT ATGTTCCTGG ACCACGTCGC CATAGCGATC GCAATTGGGA TGGGCGCCGT
AACTATAACC GCTATGATCG TGACAGATAT CACCGTCGCC ATAACCGCAG CAATGCGGGC
GCAATTATCG GTGGATTGGC CGCAGGTGCC ATCATTGGCG GCGCTCTCAG CGCACGGCCA
CAAGGTGGAA ACTCGCATAC TCAATGGTGC TATAATCGCT ACCGGTCCTA CCGGGCCTCG
GACAATACGT TCCAGCCCAA TAACGGCCCA CGCCGCCAAT GCGTTTCACC GTAA
 
Protein sequence
MKKIAAILLS AATLLTGMAP VGASAAPTSL SQPAQTQSVP GATAQGGVQV AENSWADDRR 
QRRYVPGPRR HSDRNWDGRR NYNRYDRDRY HRRHNRSNAG AIIGGLAAGA IIGGALSARP
QGGNSHTQWC YNRYRSYRAS DNTFQPNNGP RRQCVSP