| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_6136 |
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| Symbol | |
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| ID | 7380784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 1157144 |
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| End bp | 1158133 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643649627 |
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| Product | ABC transporter substrate binding protein (iron) |
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| Protein accession | YP_002547852 |
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| Protein GI | 222107061 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.327012 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGTTC TTTCCGCCCT CTTCGCCACG ACTGCAATTG TGCCGGCTTT CGCCGCCGAC
GGCGACGGCA TTGTGGTTTA CAATGCCCAG CACGAAAGCC TAGGCCGGGA ATGGGTCGAG
GCCTTTACCA AGCAGACGGG CATCAAGGTG ACGATGCGCC AGGGCAGCGA CATGCAATTT
GCCAATCAGC TCTTGCAGGA AGGCGAAGCC TCACCAGCCG ATGTGTTTCT GACGGAAAAT
TCGCCAGCCA TGACGCTGGT CGATCAAGCT GGCCTGTTTG CTCCTGTTGA TGCCGATACC
CTGGCGCAAG TGCCGGAAGA GTTTCGTCCA GCCAATGGCC AATGGATCGG CATCGCCGCC
CGCTCCACGG TGTTTGCCTA TGACAAGACC AAGCTCAGCG AAGATAAGCT GCCAAAGTCC
CTGCTCGATC TTGCCGATCC GGCGTGGAAA GGCCGTTGGG CGGCCTCTCC ATCAGGTGCG
GATTTCCAGG CCATCGTCAG CGCCCTGCTG GAGCTGAAGG GTGAGGAAGC GACCGCCAAG
TGGCTGAAGG CCTTGAAGGA AAATGCGACC TTCTACAAGG GCAACAGCGT TGCCATGAAG
GCCGTGAACG CCGGTGAAGT CGAAGGCGCG GTGATCTATC ATTATTACTG GTTCGGCGAT
CAGGCCAAGA CCGCAGAAAA CAGCGGCAAC GTGGCACTGC ATTATTTCAA GCATCAGGAC
CCGGGCGCCT TTCTCAGCAT TTCCGGCGGC GGCATCATCA AGTCCACCCA ACATATGAAG
GATGCCCAGG CCTTCTTGAA ATTCATCACC AGCAAGGAAG GCCAGGCGAT CCTGAAAACC
GGCACGTCTT ATGAATATGC AGTCGGCAAG GGTGCTGAAT CGAATGCCAA GCTCGTCCCG
ATCAAGGATT TGGATGCACC GAAGGTGGAG CCGACCAAGC TGAACAGCAA GAAGGTCACT
GAAATGATGA CGGCGGCCGG GATTCTCTAA
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| Protein sequence | MAVLSALFAT TAIVPAFAAD GDGIVVYNAQ HESLGREWVE AFTKQTGIKV TMRQGSDMQF
ANQLLQEGEA SPADVFLTEN SPAMTLVDQA GLFAPVDADT LAQVPEEFRP ANGQWIGIAA
RSTVFAYDKT KLSEDKLPKS LLDLADPAWK GRWAASPSGA DFQAIVSALL ELKGEEATAK
WLKALKENAT FYKGNSVAMK AVNAGEVEGA VIYHYYWFGD QAKTAENSGN VALHYFKHQD
PGAFLSISGG GIIKSTQHMK DAQAFLKFIT SKEGQAILKT GTSYEYAVGK GAESNAKLVP
IKDLDAPKVE PTKLNSKKVT EMMTAAGIL
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