| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_6134 |
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| Symbol | |
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| ID | 7380782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 1154309 |
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| End bp | 1155355 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643649625 |
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| Product | ABC transporter |
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| Protein accession | YP_002547850 |
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| Protein GI | 222107059 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.210402 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTTTC TCGATATTCA ATCCGTCAGC AAACAGTATG GTCATGTGCA GGCGTTGAAC
GATGTCTCGC TGGCTATTCC CGCAGGCAGT CGCACCGCCA TCGTCGGCCC TTCTGGCTCA
GGGAAAACCA CACTTTTGCG GTTGATCGCT GGCTTCGAAA TGCCGGACGC GGGCCGGATC
AGCCTTGGCG GCGCCCTTCA AGCCGAGCCG GGCTTCATGC AGCCAGCCCA TAAACGCGGC
ATCGGCATCG TCTCTCAGGA CGGCGCGCTT TTTCCCCACC TGAGTGTTGC CGACAATATC
GGCTTCGGCT TTGAACGCGG GTTGAAGAAT CGCGTTGAGC GGATCAGCAA TCTGGCCGAA
ATGGTCGAAC TCGATCCCAC CATGCTAACC CGGCGTCCTC ATCAACTCTC AGGCGGCCAA
CAGCAACGGG TGGCGTTGGC GCGCGCCCTT GGCCGTCAAC CGCGACTGAT GTTGCTGGAT
GAGCCGTTTT CAGCACTCGA CACCGGCTTG AGAGAAACCA TGCGCAAGGC AGTGTCAAAA
CTGCTGGCCG CCGCCGGGAT CACCACCATT CTTGTCACCC ACGACCAGAC AGAGGCACTA
TCCTTCGCGG ATCAGCTTGC TGTATTGCGT GATGGCAAGT TGGTGCAGGC TGGCGCGCCC
AGAGAGCTTT ACGAGCGACC GATTGACCGC CAAACAGCCC TTTTCCTTGG CGAAGCCATC
GTTCTCCCAG CAGTCTTATC AGCTGGGAAA GCCACTTGCG TGCTTGGAAC GATCCCGGTG
GAGTGTGCCA ACACTGGCAA CGGCGATATC ATGTTACGAC CGGAGCAGAT CTGCATCAAA
CCGGCAATGA CAGATGCAAG CAGACCAGTG CGGGTGCTGG ATGTCGAGTT TTCAGGCGCA
AGTGGAACGG TGACCTTGCA ACTGCAGGGT AACGATGTGG CAATGTCGCC CCTTTCCGTG
AGGATGTCAC GCCTTGATCT GCCAAGGCCA GGAGATCTGT CTTATTTGAC CGTCATCGGC
AGCGCCCACG TCCTGCCGCG CGAATAA
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| Protein sequence | MTFLDIQSVS KQYGHVQALN DVSLAIPAGS RTAIVGPSGS GKTTLLRLIA GFEMPDAGRI
SLGGALQAEP GFMQPAHKRG IGIVSQDGAL FPHLSVADNI GFGFERGLKN RVERISNLAE
MVELDPTMLT RRPHQLSGGQ QQRVALARAL GRQPRLMLLD EPFSALDTGL RETMRKAVSK
LLAAAGITTI LVTHDQTEAL SFADQLAVLR DGKLVQAGAP RELYERPIDR QTALFLGEAI
VLPAVLSAGK ATCVLGTIPV ECANTGNGDI MLRPEQICIK PAMTDASRPV RVLDVEFSGA
SGTVTLQLQG NDVAMSPLSV RMSRLDLPRP GDLSYLTVIG SAHVLPRE
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