| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_6127 |
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| Symbol | pcaC |
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| ID | 7380776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 1146888 |
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| End bp | 1147298 |
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| Gene Length | 411 bp |
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| Protein Length | 136 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643649619 |
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| Product | 4-carboxymuconolactone decarboxylase |
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| Protein accession | YP_002547844 |
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| Protein GI | 222107053 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
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| TIGRFAM ID | [TIGR02425] 4-carboxymuconolactone decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGGATA AAACAGACAC AGCATCAGAG GCACATCGGC GCGGTATGAA AACCAGGCGA
TCCGTGCTTG GCGACGCCCA TGTGGATAGG GCAACAGCGG CGGCAACCGC CTTCGATCAA
CCCTTCCAGA CGCTGATTAC CGAAAGCGCC TGGGGAACGG TGTGGTCTGG TGAGCAGTGG
ACGAAACGCG AGCGCTCTAT GGTGACGATT GCGCTGCTGG CCGCACTTGG TCAGGACGAG
GAAGTGGCCA TGCATATTCG CGCCACGGTC AATACCGGGG CAACCCGCGA GGATATACGC
GAAGCGCTGA TGCATGTGGC GATCTATGCG GGCGTTCCGG CCGCTAACCA TGCGTTCAAG
ATTGCCAAGG GCGTTTACGC GCAGATGGAT GCCGATGCAG CCTCAGCCTA A
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| Protein sequence | MTDKTDTASE AHRRGMKTRR SVLGDAHVDR ATAAATAFDQ PFQTLITESA WGTVWSGEQW
TKRERSMVTI ALLAALGQDE EVAMHIRATV NTGATREDIR EALMHVAIYA GVPAANHAFK
IAKGVYAQMD ADAASA
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