| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_6126 |
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| Symbol | pcaD |
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| ID | 7380775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 1146054 |
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| End bp | 1146845 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643649618 |
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| Product | 3-oxoadipate enol-lactonase |
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| Protein accession | YP_002547843 |
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| Protein GI | 222107052 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | [TIGR02427] 3-oxoadipate enol-lactonase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATTTC TCAAGACGAC GGACGCAGTT ATTCATTACC ACGCGATTGG CCTGGAGAGT
GACAAGCCGG TGATTGCGTT TGCCAATTCA CTCGGCACCG ATTTCCGGAT CTGGGACGAG
GTAATCGAAC GCCTCAAGGA TCGGTTCGCC TTTGTGCTGC ATGACAAGCG CGGTCATGGC
CTGTCGGATC TCGGAAATCC TCCCTACTCA ATGGCGACAC ATGTCGATGA CATGGCCACA
CTGTTGGACC ATCTTTCGTT GAAACAGGTG ATTGTCGTTG GGCTTTCTGT CGGCGGTCTG
ATTGCCCAGG GCCTTTATGC CAGCCGGCCC GATCTGGTGC GGGCGCTTAT TCTCAGCAAC
ACCGCCCATA AGATCGGCTC TGCCGAAATG TGGAACACCC GCATCGCGAC CATTCAAAAC
AACGGCATCG GAGCCTTGCT TGAACCGATC ATGGAGAGAT GGTTCACGGC GCCGTTCCGC
ACGACGGATA ATTCGGTCTA TTCGGGGTGC TGCACCATGT TGCTGCGCCA GTCAGCAGAA
GGTTATTGCG GCACTTGCGC TGCGCTGCGC GATGCCGATT TCACGGAGCA GGCATCGGCC
ATCGCCGTTC CCACGCTTTG TGTCGTTGGC GACCAAGATG GGTCTACGCC GCCGGCTCTG
GTGCAATCGC TTGCGGCCTT GATTGCCGGT AGCCGGTTTT CTGTCGTGGC TGACGCGGGC
CATATTCCCT GCGTTGAGCA ACCGGACGCC TATGTGGCGA CCTTGCTGCC GTTTTTGGAT
GAGTTGGCCT AA
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| Protein sequence | MKFLKTTDAV IHYHAIGLES DKPVIAFANS LGTDFRIWDE VIERLKDRFA FVLHDKRGHG
LSDLGNPPYS MATHVDDMAT LLDHLSLKQV IVVGLSVGGL IAQGLYASRP DLVRALILSN
TAHKIGSAEM WNTRIATIQN NGIGALLEPI MERWFTAPFR TTDNSVYSGC CTMLLRQSAE
GYCGTCAALR DADFTEQASA IAVPTLCVVG DQDGSTPPAL VQSLAALIAG SRFSVVADAG
HIPCVEQPDA YVATLLPFLD ELA
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