| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_6109 |
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| Symbol | |
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| ID | 7380762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 1132962 |
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| End bp | 1134086 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643649605 |
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| Product | ABC transporter substrate binding protein (iron) |
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| Protein accession | YP_002547830 |
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| Protein GI | 222107039 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGCTTG TGAACAACGC TGGGCTGCGG CATGATCCGT CTATGCGTTT TATCTTGTGT
ATTTCAATCC TGCTGGGCCT AGCCTTGCCA TACGTGGCCG GGACAGCGGT TGCCAGCCCC
GTATTATTTC CTGCCTTGTC GGGTAATGCG AAAGCTCCCG AGCTGCTTGT CTATTCTTCG
CTTGATGAGC CGATGGCAAA GCAGATCATT GCGGGCTTCC AGGCGAAAAA TCCCGATATC
GCGGTGCGCT ACGAGGACAT GCTGACCAGC GAAATCTACG ACCGGATCGT TCAGGAAACC
GATGCGGGCA AGACAACAGC GGATTTTGCA TTTTCATCGG CGATGGATCT GCAAGTCAAG
CTCAGCAATG ACGGCTATGC CCAGCGCAGT GACCTGCCGA TGAGCGCAAG CTGGCCCGCC
TGGGCAAATT GGCGCAACAC CGCCTATGCT CTCACATTCG AACCTGCGGT TTTCGTCTAC
CACAAGCCGA GTTTCGCCAA TCAGAAGCCG CCCTCGACGC GGGCGGAGTT CGTGGATTAC
CTGAAAAGCC AGGGAAATGC CGTCTATGGC CGGATTGGAA CCTACGATAT CGAGCGTTCA
GGGGTCGGCT TTCTGTTCAT GGCCCGCGAC CAGGAACAAT TTGGCGATAT CTGGTCGGTG
ATCCGCAGCA TGGGCACGGC GGGCGTCAAG CTCTACTCCA ACAGCTCGGC CATTCTGGAG
CGCGTCGCCG ATGGGCGATT CGTGCTTGGC TATAATATTC TGGGCTCCTA CGCTGCCGAC
TGGGCGTCGC GCCATCCCGA TGTCGGCATC GTGCTGCCCA AGGATTATAC CGTGGTGATG
TCACGTATCG GACTTGTGCC ACAGGCGGCT GCATCGCCGG AACTTGGTCG GCGCTATCTG
GAATTCTTCA TGTCGAAGGA AGGGCAGGGC ATCATGGCGC GTGAGCTGCA TATCGCGGCG
GTTAGTCCCG ATGTCGGCGG CGAAAACACT GCCAATACCA TGCAATCCCT GCTGGGCGCA
CAGCTGCGGC CCGTGCCCGT CAGTCCCGGA TTGATGGTCT ATCTCGATCA GGTCAAGCGT
ATGCGTCTCA TCGCCCGCTG GAACGAGGTT TTGCGATTGC AATAA
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| Protein sequence | MVLVNNAGLR HDPSMRFILC ISILLGLALP YVAGTAVASP VLFPALSGNA KAPELLVYSS
LDEPMAKQII AGFQAKNPDI AVRYEDMLTS EIYDRIVQET DAGKTTADFA FSSAMDLQVK
LSNDGYAQRS DLPMSASWPA WANWRNTAYA LTFEPAVFVY HKPSFANQKP PSTRAEFVDY
LKSQGNAVYG RIGTYDIERS GVGFLFMARD QEQFGDIWSV IRSMGTAGVK LYSNSSAILE
RVADGRFVLG YNILGSYAAD WASRHPDVGI VLPKDYTVVM SRIGLVPQAA ASPELGRRYL
EFFMSKEGQG IMARELHIAA VSPDVGGENT ANTMQSLLGA QLRPVPVSPG LMVYLDQVKR
MRLIARWNEV LRLQ
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