| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_6104 |
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| Symbol | |
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| ID | 7380757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 1127177 |
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| End bp | 1128742 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643649600 |
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| Product | dehydrogenase |
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| Protein accession | YP_002547825 |
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| Protein GI | 222107034 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAGT TGAAGCGATT TTACGACGTG ATCATTATTG GATCAGGTGT CGGCGGCGGC
GCGCTGGCGA ACCGGCTGGC GGAATCGGGC CGCAATATCC TGATGATCGA ACGTGGCCCA
CGGCTGCCAC GCGAAGACGA CAACTGGAGC GTCGATGCGG TTTTTCACCA GAAAAAATAT
GCAACGACCG AAGAATGGCG CGACAAGGAT GGTCAATCTT TCCGCCCCAG CACGTTTTAT
TATGTCGGCG GCAACAGCAA ATTCTTCGGT GCGGCGACCC TGCGCTTTCG CCGGGAGGAT
TTCGAGGATT TGGCCCATGA AGGCGGCATT GCCCCGGCCT GGCCGGTTTC CTACGATGAG
TTTGAGCCTT ATTATGCTGT GGCCGAACGG TTGATGGGGA CGCATGGAAC GGCGGGCATC
GACCCGACCG AGCCGCCACG CTCCGGCCCC ATGCCGCATC CGGCCATTGG CCATGAACCG
GAAATCGCCT TCTTCGAAAA AAAGCTGAAG GAAAGGGGAC TGCATCCCTT TCCGTTGCCG
ATTGCCATTG ATTACCATCA GGGCGGCAGC TGTATCCGAT GTCGGACCTG TGACGGCTTT
GCCTGCAAGC TCGGCGCCAA GGGGGATGCG GAGGTGCGCC TCGTCAATCC GGCGCTCGCC
CGTGGCAAAG GTAAGATCGA GCTTGTCACG GAAGCCTTTG TACATCGTTT GCTGACCGAT
CCGACTGGCA AGAGGGTGAC GGGTGTTGAA CTGACCCATG CGGGTGAGAA AAAGCTGATC
GAAGCCGACC TGTTCGTCTC CAGTGCAGGT GCGATCAATT CGGCAGCCCT TCTGCTGCGA
TCAGCCAATC AGGCCCATAA GCGCGGCATC GGCAACAGCA TGTCCGACCA GCTCGGCCGC
AATTACATGG CGCATAACAA TACGGCGTTG ATGGCGATTT CGCCCTTCAA GAAGAACCGG
GTCATCTTCC AGAAATCCAT GGCAATCAAC GATTATTATC TCGCCAATAC CGAAAAACCT
TATCCGCTTG GCAATATCCA GGGGCTTGGC AAATTGCAGG GCGGCATGCT GACCGCTGGT
GCGGCCTGGG CGCCGGAATG GTTGATGTCG ATCTTCGCCG ACCGCAGTGT CGATTGGTGG
CTGATGTCGG AAGACCTGCC CGATCCTGAA AACCGCGTCA CCGTCGATCC GGATGGCCGC
ATCCGTTTGA GCTATACGGC CAACAATCTC AAATCGCACA ATGAATTGGT GAAGGTTTGG
TCACGGCATA TGCGCGCGTT GGGCTATCCG CTGATCATCA CCAACAAGAT GGACATCAAG
GTGTCCATGC ATCAATGCGG CACCGCACGC TTTGGAAAGG CACCGGAAAC CTCGGTTCTG
GACACGCATT GCAAGGTTTG GGATGTCGAT AATCTCTATG TCGTCGATGC GTCCTTCCTG
CCGTCCTCCA CCGCCGTCAA TCCGTCGCTG ACCATTGTCG CGCAGGCGCA GCGGACCGCC
GAACATATTC TGGCCCAATG GGGCGAAACC GCCGTTACGC CACAGGCTTC ACCAACCGTG
GCCTGA
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| Protein sequence | MSELKRFYDV IIIGSGVGGG ALANRLAESG RNILMIERGP RLPREDDNWS VDAVFHQKKY
ATTEEWRDKD GQSFRPSTFY YVGGNSKFFG AATLRFRRED FEDLAHEGGI APAWPVSYDE
FEPYYAVAER LMGTHGTAGI DPTEPPRSGP MPHPAIGHEP EIAFFEKKLK ERGLHPFPLP
IAIDYHQGGS CIRCRTCDGF ACKLGAKGDA EVRLVNPALA RGKGKIELVT EAFVHRLLTD
PTGKRVTGVE LTHAGEKKLI EADLFVSSAG AINSAALLLR SANQAHKRGI GNSMSDQLGR
NYMAHNNTAL MAISPFKKNR VIFQKSMAIN DYYLANTEKP YPLGNIQGLG KLQGGMLTAG
AAWAPEWLMS IFADRSVDWW LMSEDLPDPE NRVTVDPDGR IRLSYTANNL KSHNELVKVW
SRHMRALGYP LIITNKMDIK VSMHQCGTAR FGKAPETSVL DTHCKVWDVD NLYVVDASFL
PSSTAVNPSL TIVAQAQRTA EHILAQWGET AVTPQASPTV A
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