| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_6103 |
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| Symbol | garD |
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| ID | 7380756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 1125534 |
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| End bp | 1127066 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643649599 |
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| Product | D-galactarate dehydratase |
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| Protein accession | YP_002547824 |
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| Protein GI | 222107033 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2721] Altronate dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGTGA CTTCGGTTTC TTCGCCGCTG CTTAGGCTCA ATATGCGCGA CAATGTTGCC
GTTGCCCGGC TGACGCTGGA GCCGGTGGCG CTGCCCGAAC TTGGCGGCGC GCAGCTCTCG
ACCCGGATCA CCCAGGGACA CAAGGTTGCC ATCACGGCCC TTCAGCCGGC GCAGGCCATC
ATCAAATATG GCCAGATCAT TGGCTTTGCC ACGCAGCCGA TTGCGGTTGG TGACCATGTT
CACACCCACA ATATGGCGAT GGGGGATGTG GAGCTGGCCC ACGAGTTTTG CGTGGACGCG
CAGGAGCCTG TTTTTGTGCC AGAGCCTGCG ACGTTTATGG GGTATCGGCG AGAGAATGGC
GAGGCTGGCA CCCGCAATTA CATCGCCATC GTCTCTTCCG TGAACTGTTC CGCCACCGTG
GCCAAGGCCG TGGCGCAGCA TTATGCACAA CCGGGCAGGC TTGACGATTT CGCCAATGTC
GATGGGGTCA TTGCGCTCAC CCATGCAGGC GGCTGTGCCA TCAATACCGC GACCGAGGGT
TATCTCTATC TCACCCGCAC GCTGGCCGGT TATGCCACCC ACGCCAATGT CGGCGGCGTG
GTGATGATCG GCCTTGGCTG CGAAACCAAC CAGATTCCGG CTTTGCTTGC CGCTCATGGC
CTCACCGAGA GCGATAGATT TCACACGCTG ACCATTCAGG CGACCGGCGG CACACGCAAA
TCCATTGAAG CCGCGATTGC AGCCATCAAT TCAATGTTGC CTGTCGTCGA TGCCTTGGAG
CGCACGCCGC AACCGGTGTC GAAGCTGAAA TTGGCGCTCG AATGCGGCGG ATCGGATGGG
TATTCCGGGA TTTCCGCCAA TCCGGCGCTT GGCTATGCTG CCGATCTGCT GGTGCGCCAT
GGTGGAACCG CTTGCCTCGC CGAGACACCG GAAATCTACG GTGCCGAACA TTTGTTGACC
CGGCGGGCCA AAAGCCCTGA TGTGGCACAA AAGCTGCTGG AGCGCATCGA ATGGTGGCGC
GATTATGCGG CGCGGGGCAG GGCGGAGCTG AACAACAATC CATCCCATGG CAATAAGGCC
GGTGGGCTGA CCACAATTCT GGAGAAGTCG CTGGGTGCGG TGGCCAAAGG CGGCACGACC
AGGCTCAACG CCGTCTATGA ATATGCCGAG CGCATCGTGG AACCCGGCTT CGTCTTCATG
GATACGCCTG GCTATGACCC GATTGCCGTG ACCGGCCAGG TGGCGGGCGG CTGCAATGTC
ATCTGTTTCA CCACTGGGCG TGGTTCGGTT TCCGGCTTCA AGCCGGCGCC ATCCCTGAAG
CTTGCCACCA ACACACCGAT GTATGAGCGG ATGCAGGAGG ACATGGACCT CAATTGCGGC
ACCATCGTCA CCGGCGATGA GACGGTGGAG GCGGTCGGGC AACGGATTTT CGAAGCCGTG
ATCGCCACAG CCTCGGGCGA GCGCACAGTG AGCGAGATCT ACAATTACGG CGACAACGAA
TTCGTCCCCT GGCAGGTCGG CGCGATCATG TAA
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| Protein sequence | MTVTSVSSPL LRLNMRDNVA VARLTLEPVA LPELGGAQLS TRITQGHKVA ITALQPAQAI
IKYGQIIGFA TQPIAVGDHV HTHNMAMGDV ELAHEFCVDA QEPVFVPEPA TFMGYRRENG
EAGTRNYIAI VSSVNCSATV AKAVAQHYAQ PGRLDDFANV DGVIALTHAG GCAINTATEG
YLYLTRTLAG YATHANVGGV VMIGLGCETN QIPALLAAHG LTESDRFHTL TIQATGGTRK
SIEAAIAAIN SMLPVVDALE RTPQPVSKLK LALECGGSDG YSGISANPAL GYAADLLVRH
GGTACLAETP EIYGAEHLLT RRAKSPDVAQ KLLERIEWWR DYAARGRAEL NNNPSHGNKA
GGLTTILEKS LGAVAKGGTT RLNAVYEYAE RIVEPGFVFM DTPGYDPIAV TGQVAGGCNV
ICFTTGRGSV SGFKPAPSLK LATNTPMYER MQEDMDLNCG TIVTGDETVE AVGQRIFEAV
IATASGERTV SEIYNYGDNE FVPWQVGAIM
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