| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_6092 |
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| Symbol | |
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| ID | 7380745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 1113718 |
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| End bp | 1114794 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643649588 |
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| Product | ABC transporter nucleotide binding/ATPase protein (polyamine) |
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| Protein accession | YP_002547813 |
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| Protein GI | 222107022 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.196126 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCCTT TTCTGGAAAT TCGCGGTATC CGCAAGCAAT ATGGCCCGGT GGTCGCGGTG
CAGGATGTCA ATCTTGAGGT GGCAAAGGGC GAGTTCATGA CCTTTCTCGG CCCATCCGGG
TCCGGCAAGA GCACGACACT TTATATTCTG GCCGGTTTCG AACAGCCGAG TGCGGGCGAT
ATGCTGCTAT CGGGCAAGAG CGTGTTGCAG ACCCCATCAC ACCAACGCAA TATCGGCATG
GTGTTCCAGC GCTACACGCT GTTTCCGCAT TTGTCTGTTG GTCAGAACAT CGCCTTTCCG
CTGAAAATGC GCGGCTGGTC GAAGGCTGAT ATCACCGAGC GCGTCCGCAA GATGCTGCAA
TTGGTGCGGC TGGAAGGTTA TGAGGATCGC AAACCGGCGC AAATGTCCGG CGGTCAGCAG
CAGCGTGTCG CGTTGGCCCG GGCGCTGGCT TACGATCCGC CGGTGCTGTT GATGGACGAG
CCGCTTTCGG CGCTGGACAA GAAATTGCGC GAGGAAATTC AGCACGAAAT CCGCCGCATC
CATCACCAAA CGGATGTCAC CATCCTTTAC GTCACCCATG ACCAGGAAGA GGCACTGCGG
CTTTCCGATA GGATTGCGGT GTTTTCCAAA GGGGTGATCG ACCAGATCGG CACCGGTGCC
GAGCTTTATG CCAATCCGGC GACGCGGTTT GTGGCGGAGT TTATCGGGGA CAGTGATTTT
CTGCCCTGCG TGGTGACGGG TGCCAGGGAC GGTAAGGCTG AAATTCAGCT CGGCAGTGAT
TTGACCATAG GAAATATTCC GCTGCATGGG AAAGCGCAGA ATGGAAGCAA TGCCATGCTG
ATGCTGCGCC CGGAGCGGTT GACGCTGGTT TCTGCTCAAG GGCCGGGAAT GCTTGCTGCC
AAGATTGAAG ACATTACGTT TCTCGGCAAC ACAATTCACA TCGCGGTTTT GAGTGAAGGT
GGCCATGCCC TGTCCGTGCG TTTGCCTTTT GGCCATGCCG CACTGGAGGG ATTGACGATC
GGTGCGCCTG TTGCGCTGGG GTTTGATCCG GTGTCAGCGC ATGTTTTCGC AGAATAG
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| Protein sequence | MTPFLEIRGI RKQYGPVVAV QDVNLEVAKG EFMTFLGPSG SGKSTTLYIL AGFEQPSAGD
MLLSGKSVLQ TPSHQRNIGM VFQRYTLFPH LSVGQNIAFP LKMRGWSKAD ITERVRKMLQ
LVRLEGYEDR KPAQMSGGQQ QRVALARALA YDPPVLLMDE PLSALDKKLR EEIQHEIRRI
HHQTDVTILY VTHDQEEALR LSDRIAVFSK GVIDQIGTGA ELYANPATRF VAEFIGDSDF
LPCVVTGARD GKAEIQLGSD LTIGNIPLHG KAQNGSNAML MLRPERLTLV SAQGPGMLAA
KIEDITFLGN TIHIAVLSEG GHALSVRLPF GHAALEGLTI GAPVALGFDP VSAHVFAE
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