| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_6086 |
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| Symbol | |
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| ID | 7380739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 1107408 |
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| End bp | 1108328 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643649582 |
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| Product | flavoprotein oxidoreductase |
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| Protein accession | YP_002547807 |
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| Protein GI | 222107016 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1051] ADP-ribose pyrophosphatase
[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.414273 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAAG CGATAATCGA TCCCCGCAGC CTGCGTGATG CCTTCGGCGC GTTCGCCACC
GGCGTCACCG TTGTCACCAC GCTTGACCCT CATGGTTCTC CCATCGGCTT TACCGCCAAT
TCCTTCACCT CGGTCTCCCT CGATCCGCCT TTGCTGCTGG TCTGTCTCGC CAAAACCTCG
CGCAATTTTG AGGTGATGAC CAAGGCCAAA GGCTTTGCGG TCAATATATT GTCGGATGCG
CAGAAGGATG TGTCCAACAC CTTTGCAAGG CCTGCGGAAG ATCGTTTCGC AAGCGTGGAG
TGGCAGCTTG GTCCTCATGG TTCTCCGGTG TTTTCAGGCA CGTCTGCCTG GTTCGATTGC
AGCCTTGAGA CTGTCATTGA GGCAGGTGAT CATGTCGTGC TGCTGGGGCG GGTACAGGCA
TTCGACAAAA GTGAGTTGAA CGGGCTTGGC TATGTGCGCG GTGGTTATTT CACACCGGCC
CTTGCCGAAA AAGCGGTCAG TGCCGCCAGC GATGGCCCGC TGCATCTGAG CGCCGTTATC
GAGCGGGACG GCGAGGTTCT TTTGGTGGGC GAGGGTGGCC GCAGCCTGCC GGGTTGTCAT
GCGGTCAGCG GCGAGCCTTT GCAGGATCTG AAAGCCCATC TCGAACACGA GACAGGGCTC
AGCATTACCA TCGGGTTTCT GTATTCCGTC TACGAAGACA AGAGCGAGGG ATGTCAGCAT
ATCGTTTACC GGGCTTTTGC GGGTCCCGGC GCGCCGAAAT ACGGCAATTT CGTTCCGGTT
GACCAGCTTG CCGGTCCGGG CGGCGCGGCC ACGGCGGATA TTCTCAACCG GTTCGCGGCG
GAAAGCTCCA TTGGCAATTT TGGCGTCTAT GTTGGCAACG AGACGGCAGG CCGGGTTCAC
TCCATTGCCA GGAAGGCTTG A
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| Protein sequence | MSEAIIDPRS LRDAFGAFAT GVTVVTTLDP HGSPIGFTAN SFTSVSLDPP LLLVCLAKTS
RNFEVMTKAK GFAVNILSDA QKDVSNTFAR PAEDRFASVE WQLGPHGSPV FSGTSAWFDC
SLETVIEAGD HVVLLGRVQA FDKSELNGLG YVRGGYFTPA LAEKAVSAAS DGPLHLSAVI
ERDGEVLLVG EGGRSLPGCH AVSGEPLQDL KAHLEHETGL SITIGFLYSV YEDKSEGCQH
IVYRAFAGPG APKYGNFVPV DQLAGPGGAA TADILNRFAA ESSIGNFGVY VGNETAGRVH
SIARKA
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