Gene Avi_6083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_6083 
Symbol 
ID7380737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011988 
Strand+ 
Start bp1105923 
End bp1106525 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content58% 
IMG OID643649580 
Producthypothetical protein 
Protein accessionYP_002547805 
Protein GI222107014 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCTGC ACATCCGCAA AACTCTTCTG CATGTGGAAA CCACCCTGGT GGAAGGCGGC 
AAGGCAGCGC CGACACCATT GAAGCTCTAC GCGGCTTTTG CTGTCGTTAA AAATCCCTGG 
GCCGGACGCG GCTTTGTCGA GGATCTGAAA CCGGAAATTC ATCAATGCGC CCCGGTTCTC 
GGCGAGCTTC TGACAGGCAT GATTCTGGAT GCCGTTGGCT CTGGCGAAGC GGTCGAGGCC 
TATGGCAAGG TTGCCGTTGT TGGTCTTGAT GGCGAGATCG AGCATGCTTC GGCGCTGATC 
CATACGTTGC GCTTCGGCAA CCATTACCGC ACGGCGGTGG GGGCAAAATC CTATCTCGCA 
TTTTGTAACA CCCGCGGTCC GGCCAATGCC CCAATCATGA TCCCATTAAT GGACAAGAAT 
GACGAAGGTC GCCGCTCCCA TTATCTAACG ATTCAGACGG CCATTGCCGA TGCACCAGCT 
GCCGACGAAA TCGTTGTCGG GCTTGGTGCG TCTGTCGGCG GAAGGCCCCA TCACCGGATC 
GGCGACCGCT ATCAGGATCT GAAAGATCTG GGCCAGGATG TCGCCAACCC GGCTGGCGTA 
TAA
 
Protein sequence
MALHIRKTLL HVETTLVEGG KAAPTPLKLY AAFAVVKNPW AGRGFVEDLK PEIHQCAPVL 
GELLTGMILD AVGSGEAVEA YGKVAVVGLD GEIEHASALI HTLRFGNHYR TAVGAKSYLA 
FCNTRGPANA PIMIPLMDKN DEGRRSHYLT IQTAIADAPA ADEIVVGLGA SVGGRPHHRI 
GDRYQDLKDL GQDVANPAGV