| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_6079 |
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| Symbol | dadA |
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| ID | 7380733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 1102029 |
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| End bp | 1103294 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643649576 |
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| Product | D-amino acid dehydrogenase small subunit |
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| Protein accession | YP_002547801 |
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| Protein GI | 222107010 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGTTA CCATTCTGGG CGCGGGCGTC ATCGGTGTCA CCAGTGCTTA CTATCTCGCC
AAAGCCGGGC ATGAAGTGAC CGTCATCGAC AGGCAGACGG GTCCGGCCCT GGAAACCAGC
TTTGCCAATG CGGGAGAAGT GTCCTTCGGC TACTGCTCGC CCTGGGCAGC GCCCGGCATT
CCGCAAAAAG CGTTGAAATG GCTGTTCATG GAACATGCCC CGCTGATCCT GCGACCGAAA
ATCGATGCTG CCATGCTGGG TTGGATGCTG AGAATGCTCT CTAACTGCAC CTCCGGGCGC
TACGCGATCA ACAAAAGCCG GATGCTGCGG CTGGCCGATT ACAGCCGGAT TGCGCTGGCG
CAGCTGCGCA CCGAGACCAA TATCGACTAC GACCAGCGCA TGCAGGGCAC TTTGCAGCTG
TTTCGAACTC AGGCGCAGCT GGATGCCTCG GCGAAAGATG TGAAAGCACT GGCGGCGGAC
GGTATTCCCT ATGAAGTGCT GGACCGTGAA GCCTGCATCC GGGTCGAGCC TGCCTTGGCG
GCAGCCCGCC ATAAAATCGT CGGCGGCTTG CTGACGCCGA AGGACGAGAC CGGCGACTGT
TTCAAATTTA CCAATCAGCT CGCTGAAAAG GCCGCCTCGC TTGGCGTGGT GTTCGACTAT
GGCCGCAGCA TAGAACGGTT GGTGGTGTCG GGGGGCAAGG TCACCGGCGT TGTCACCGAC
AGGGGAACCG AAACCGCCGA CGCCTATGTC GTGGCACTCG GCAGCTATTC GCCACTGCTG
TTGAAGCCGC TCGGCATCAC ACTGCCGGTC TATCCGGTCA AGGGCTATTC GCTCACCATT
CCAATTGTCG ATCCATCGAA ATCCCCCGAA TCCACCGTGA TGGACGAGAC CTACAAGATC
GCCATCACCA GGTTGGGCGA CCGGATCAGG GTGGGCGGCA TGGCCGAAAT TTCCGGTTAT
ACCAATGATC TGGGTGCCGC GCGTCGCCGC ACACTCGAAC ATTCCGTCAC CGACCTGTTT
CCCGGCGGCG ATATGGGGCG AGCCGATTTC TGGTCAGGCC TTCGCCCGAT GACGCCGGAT
GGCACGCCAG TGATCGGCGC AACCGGCATC AGCAATCTCT ATATCAACAG CGGCCATGGA
ACATTGGGCT GGACAATGAG CTGCGGTTCA GGCCGTTTGC TCAGCGACAT CGTCAGTGGC
CGCCAGACCG AGATCGACAA TGCCGATCTG GCACTGAGCC GCTATGCTGC CGGTCGCGTC
GGATAA
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| Protein sequence | MKVTILGAGV IGVTSAYYLA KAGHEVTVID RQTGPALETS FANAGEVSFG YCSPWAAPGI
PQKALKWLFM EHAPLILRPK IDAAMLGWML RMLSNCTSGR YAINKSRMLR LADYSRIALA
QLRTETNIDY DQRMQGTLQL FRTQAQLDAS AKDVKALAAD GIPYEVLDRE ACIRVEPALA
AARHKIVGGL LTPKDETGDC FKFTNQLAEK AASLGVVFDY GRSIERLVVS GGKVTGVVTD
RGTETADAYV VALGSYSPLL LKPLGITLPV YPVKGYSLTI PIVDPSKSPE STVMDETYKI
AITRLGDRIR VGGMAEISGY TNDLGAARRR TLEHSVTDLF PGGDMGRADF WSGLRPMTPD
GTPVIGATGI SNLYINSGHG TLGWTMSCGS GRLLSDIVSG RQTEIDNADL ALSRYAAGRV
G
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