| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_6074 |
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| Symbol | kdpA |
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| ID | 7380895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 1094484 |
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| End bp | 1096193 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643649572 |
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| Product | potassium-transporting ATPase subunit A |
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| Protein accession | YP_002547797 |
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| Protein GI | 222107006 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2060] K+-transporting ATPase, A chain |
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| TIGRFAM ID | [TIGR00680] K+-transporting ATPase, KdpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTCCA ACGGTTGGCT GCAAATCGGC TTGCTGCTCG CTCTCGTCTT CCTCACCATC
AAACCGCTTG GGCTTTACAT CGCCTGCGTG TTCGAGGGGC AGCGGACGTT TCTCTCTCCC
ATTCTCGGCC CTCTTGAGCG GCTGCTCCTG CGCATATCCG GCGTTGATGC GCGCCGCGAA
CAAGGCTGGC TAGCCTATAC GCTTGCCATG CTCGCCTTCA ATGCCGCTGG CTTTCTGGCG
CTTTATGGCA TTTTGCGGCT TCAGGCCTAT CTGCCCTATA ATCCGCAGGG CTTTGCTGGC
ATGACACCCG ATCTGGCCTT CAATACCGCG ATCAGCTTCG TCACCAATAC CAATTGGCAG
GCCTATTCCG GCGAACAGTC CGCCAGCCAT TTCTCGCAGA TGGCAGGCCT TGCGGTCCAG
AACTTCCTGT CGGCGGCCAC CGGTATTGCC ATTGCGCTGG CCGTCACCCG GGCCTTTGCC
CGCTCGGCTG CCAACACACT CGGGAATTTC TGGGTCGATA TGACCCGCTC GACGCTGTAT
CTGCTGCTGC CAATGTCGAT TGTGCTGGCT CTGGTTTTCG TCTGGATGGG CATTCCTCAA
ACCCTCGATG CATCTGTGAC GGCCACGACA CTGGATGGCG CCCAACAGAC CATCGCACTG
GGCCCGATTG CCAGCCAGGA AGCCATCAAG CAGCTCGGCA CCAATGGCGG CGGTTTCTTC
AATGCCAATG CGGCCCATCC GTTTGAAAAC CCCTCGGCGA TCAGCGATTA TTTCAACATC
CTCGCAATGA TGTCGATCAC CATGGCGCTG ATCTATGCCT TCGGCAAAAT GGTCGGCGAC
CTGCGCCAGG GTTGGGCGCT GATTGCCAGT GTGGCCGTGC TGCTGATTGC CGGCATCGCC
GCCGTCTATA TCGCTGAAAC CGCAGGCAAC CCGATCCATC TGGCGCTTGG GCTCGATCCT
TCATTCGGCA ATATGGAGGG CAAGGAAGTC CGCTTTGGTC AGGCGATGAG TGCGGCTTAT
ACGGCGATCA CAACAGGCAT TTCCAACGGT GGCGTCAACA CCATGCATGG TTCGCTGACC
CCGCTTGGCG GTCTGGTGCC ACTGTTCCTG ATCCAGCTTG GCGAAATCCT TCCCGGTGGC
GTCGGCTCCG GCCTTTACGG GCTGATCGTC TTCTGTGTGC TGACTGTCTT CGTCGCTGGC
CTGATGGTCG GGCGCACACC GGAATTCCTG GGCAAGAAGA TCGAGGCCCG GGAAATGAAA
TTTGCCATGC TGGCCGTACT GGTCCTGCCC TTTGCCATTC TGGGGTTCTC GGCGATTGCT
GCCGTACTCC CCAATGCGCT GGCTTCGCTT GGCAATGCCG GACCGCATGG TCTGTCGGAA
ATACTCTATG CCTATACGTC TGCGGCTGGC AATAACGGCT CGGCATTTGC AGGGCTTTCG
GCCAATACGG CCTGGTATAA TACCACGCTC GGCATTTCCA TGGCGCTTGG CCGCTTCGCC
TATGCGGTTC CCGTCCTCGC CATTGCCGGT TCTCTCGCTG CAAAGACAAA AGGCACGGCC
TCGGCAGGTA CCTTCCCCAC GCACACGCCG CTCTTTGTCG GCCTGCTCGT CGCCATCATC
ATCATCCTGG GCGGGCTGCA ATACTTCCCA GCATTGGCAC TTGGTCCCAT TGCAGAACAT
GTCGGCATGC TCGCCGGAAC CCTTTATTGA
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| Protein sequence | MSSNGWLQIG LLLALVFLTI KPLGLYIACV FEGQRTFLSP ILGPLERLLL RISGVDARRE
QGWLAYTLAM LAFNAAGFLA LYGILRLQAY LPYNPQGFAG MTPDLAFNTA ISFVTNTNWQ
AYSGEQSASH FSQMAGLAVQ NFLSAATGIA IALAVTRAFA RSAANTLGNF WVDMTRSTLY
LLLPMSIVLA LVFVWMGIPQ TLDASVTATT LDGAQQTIAL GPIASQEAIK QLGTNGGGFF
NANAAHPFEN PSAISDYFNI LAMMSITMAL IYAFGKMVGD LRQGWALIAS VAVLLIAGIA
AVYIAETAGN PIHLALGLDP SFGNMEGKEV RFGQAMSAAY TAITTGISNG GVNTMHGSLT
PLGGLVPLFL IQLGEILPGG VGSGLYGLIV FCVLTVFVAG LMVGRTPEFL GKKIEAREMK
FAMLAVLVLP FAILGFSAIA AVLPNALASL GNAGPHGLSE ILYAYTSAAG NNGSAFAGLS
ANTAWYNTTL GISMALGRFA YAVPVLAIAG SLAAKTKGTA SAGTFPTHTP LFVGLLVAII
IILGGLQYFP ALALGPIAEH VGMLAGTLY
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